Secondary endosymbiont of Ctenarytaina eucalypti: A359_05080
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Entry
A359_05080 CDS
T02199
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
sect
Secondary endosymbiont of Ctenarytaina eucalypti
Pathway
sect03030
DNA replication
sect03410
Base excision repair
sect03420
Nucleotide excision repair
sect03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sect00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A359_05080
03410 Base excision repair
A359_05080
03420 Nucleotide excision repair
A359_05080
03430 Mismatch repair
A359_05080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sect03032
]
A359_05080
03400 DNA repair and recombination proteins [BR:
sect03400
]
A359_05080
Enzymes [BR:
sect01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
A359_05080
DNA replication proteins [BR:
sect03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
A359_05080
DNA repair and recombination proteins [BR:
sect03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
A359_05080
NER (nucleotide excision repair)
GGR (global genome repair) factors
A359_05080
MMR (mismatch excision repair)
DNA ligase
A359_05080
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
A359_05080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
5_3_exonuc
PTCB-BRCT
Nlig-Ia
MreB-like_C
Motif
Other DBs
NCBI-ProteinID:
AFP84900
UniProt:
J3TXJ1
LinkDB
All DBs
Position
complement(736988..739015)
Genome browser
AA seq
675 aa
AA seq
DB search
MMKRIEKHILRLRAKLQHWEDLYYVASSPEVPDSEYDRMMAELRVLETKRQDLLTVNSPS
QRVGGHAQHSFGQVRHHVPMLSLDNVFEESDFLAFDQRLRERLKCYEDLTYCCELKLDGL
AVSLLYERGELVRGASRGDGTTGEDITANIRVIRTVPLRLRGETSSLPRLLEIRGEVFMP
EAGFQKLNHAAKRNGGKVFANPRNAASGSLRQLDPAITAQRPLMFSCYGVGLLEHGMLPD
SHWQRLQQLKSWGVSVSDQMRLCTGTDAVQKFYQKVYKARSTLGFDIDGVVIKVDALLLQ
QRLGVVARAPRWAIAYKFPAQEEITRVRDVAFQVGRTGVITPVAKLEPVLVSGTMVTKAS
LHNADEINRLGVRIGDAAIVRRAGDVIPQIVGVISSKRPKNARLVAFPSQCPSCSTELEH
VGGAVVLRCPAGLVCSAQLQEALKHFVSRRAMNITGIGDKTIDQLVQRALVKTPADLFRL
TKDILRQLDHVGPKAAQNLLDALEKAKKSTFARFLYALGIREVGETTAENLAAAYGTLDS
LIAADIHSLTEVKNIGNIAATHVQKFFEIRHNLKVVRELLSPPIGIHWPVSVVPSTEEES
CFFSGKTVVLTGVLRSLSRDAAKDRLVSLGARVSNRISATTDLLIVGELAGSKLFKAQQL
SIPMMDEAEMIRHLG
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaacggatagaaaaacatattttgcggttacgtgcgaagctacaacattgggaa
gatctttattacgtcgcgtcttcccctgaagtgccagatagtgaatatgatcggatgatg
gccgagctgcgcgtactagagactaaacgacaggacttactgaccgtcaactctcctagc
cagcgtgtcggagggcatgctcagcatagctttggccaggtgcgtcatcatgtgcccatg
ctctcgttagataatgtttttgaagagtctgatttcctggcgttcgatcagcggttgcgg
gagaggcttaagtgctatgaggacctgacctattgttgtgaactcaaactagatggtctg
gcggtaagcttgctatatgaacgaggagagctagtacggggagccagtcggggcgatgga
actaccggagaagatatcaccgccaatatccgtgttattcgcactgttccattgcgcttg
aggggggagaccagctctctgccgcgcttgcttgagatccgtggggaggtgtttatgcca
gaagctggattccagaagcttaatcacgctgcaaaaagaaatgggggaaaagtcttcgcc
aatccacgcaatgccgcttccggctccttgcgtcagctggatcctgccattaccgctcag
aggccgctgatgttttcttgctatggcgttgggttgctggaacatggcatgttgcctgat
agtcattggcagaggctacagcagttgaaatcctggggtgtatcagttagcgatcaaatg
cgactctgtaccggcaccgatgcggtacagaagttctatcaaaaagtgtataaagcgcgt
tcaacgctcgggtttgatatcgatggagtggttattaaagtagatgcgctattgttacag
cagcgtttaggtgttgttgcacgagcgccacgctgggccattgcctacaagtttccagcg
caggaagaaataacacgagtgcgtgatgtggcgtttcaggtagggcgtaccggggtgatt
acgccggttgcgaaactagagccggtcttggtatctggtacaatggttacaaaagctagc
ctacacaacgcagatgagatcaatcggctaggggtaagaattggcgatgcggcgattgtt
cgccgtgcgggggatgtaatcccacaaatcgtcggtgtaatctcctctaagcggccaaag
aatgcgcggctagtcgccttcccatctcagtgcccgtcctgtagcacggagctggagcac
gtagggggtgcggtagtgttacgttgccccgcaggtctcgtttgttctgcgcaactacag
gaggcgctgaagcattttgtgtcgcgtcgagcgatgaacatcaccgggataggggataag
acgatcgatcagctcgtgcagcgagcgctagtgaaaacgccggctgatttattccggcta
acaaaagatatcttgagacaacttgatcatgtggggccaaaggcggcgcaaaatttgctg
gatgcactcgagaaggctaagaagagtactttcgcgcgttttctctacgcgctcgggatc
cgcgaggtgggagagacgacggccgaaaatctagctgccgcttatggcaccctagactcg
ctgatagccgccgatattcattcactaactgaggtgaaaaatatcggcaatattgcggca
acccacgtgcaaaagttttttgagataaggcataatcttaaggttgttagagagttgtta
agtccaccgataggtattcattggccggtgtctgtggtcccttctaccgaagaagagagc
tgttttttttctggtaagaccgttgtacttacaggagtactcagaagcctttcgcgagat
gcagccaaagataggctagtgtcgctcggtgctcgggtcagtaacagaatttctgctaca
actgatctcctgatcgtaggggagctagctggctctaagttatttaaggcacagcaattg
agtattccgatgatggatgaggcagaaatgatacgtcatttaggataa
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