Parasedimentitalea marina: EBB79_10800
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Entry
EBB79_10800 CDS
T05780
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
sedi
Parasedimentitalea marina
Pathway
sedi01501
beta-Lactam resistance
sedi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sedi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EBB79_10800
01503 Cationic antimicrobial peptide (CAMP) resistance
EBB79_10800
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sedi02000
]
EBB79_10800
01504 Antimicrobial resistance genes [BR:
sedi01504
]
EBB79_10800
Transporters [BR:
sedi02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
EBB79_10800
Antimicrobial resistance genes [BR:
sedi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EBB79_10800
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Molydop_binding
Motif
Other DBs
NCBI-ProteinID:
AZV78316
UniProt:
A0A3T0N2Q6
LinkDB
All DBs
Position
complement(2196092..2199220)
Genome browser
AA seq
1042 aa
AA seq
DB search
MFSSLFISRPKFAIVISMVLTIMGLIGYMALPVAQFPDITPPVVSVTASYTGANAETVEK
SVAAPIEAQVNGVDDMIYMSSSSSDTGSYSLSVTFEVGTDPDIASVNVQNRVAQALSSLP
AEVTSSGVVTQKSSTNMLLVATLTSPNATYDDLFLSNYAEINIKDALSRVAGVGKADILN
SLSYSMRIWMNPEKMAALGITPGDLINAVKEQNLEVSAGQIGAPPVPGDQTFQYTIKSKG
RLTSVDEFGDIVIRTGEAGSTVRVRDVATVELGASNYSTSGFYDGSEATILAVYQAPGAN
ALAVSAAVLAELDRLAMSFPEDVIYSVPFNTTDFVEQSLADVISTLVLAFILVVSVVFVF
LGSWRATIIPAVAIPVSLIGTFAFLLLLGMSLNTISLFALVLAIGIVVDDAIIVVENVER
LIAEEGLNPSDATRKAMGQITGPVIATTLVLLAVFVPVTFMPGISGELFSQFAVTISVAV
VISSINALTLSPALCGLVLKARSGPPTGLLAKFESAIDILRNGYLGIVGRLLRWPFLAVA
LVLAMYAGTGTLFGITSKGFLPAEDNGYLFVDIQLPDAAALGRTEVVTKRVNEQIEQIPG
VHSTILVNGFSMLNGASANGAMIIINLDPWDERQTPDLFPTSILKQVYGLANAEAAASIV
AFNPPPISGLGMSAGVEMEVQQTAGGTPQDLAAAVGSLVYAANQRGEIGQSYTTFRANVP
QVFVDLDREKAKTLDVSISEVFLTMQAHLGSYYVNDFNLFGRVYRVMVQADGSYRDKIED
IGNLYVRSQSGKMVPLSTLIDVENILGPVILKRHNMFRSATVTAVPAAGLSTGDAIGVMQ
EEAATALPPGYSFEWTGTAQQQLSSSGLVVVILGMAILFTYLFLVAQYESWTMPIAILLS
VVVAMFGAVVAVAVTGSDINLYTQIGMIMLIGMAAKNGILIVEFAMERRAAGLSIKEAAH
EAGRQRFRAVMMTAFSFLLGVVPLLMASGAGAASQQAIGVAVFGGMLMATVVGVILIPVL
YAFMQGLREWVKGSAKTVSPAE
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgttctcatccctgttcatttcacgccccaagtttgcgatcgttatatcaatggtcctg
acgatcatgggcctgattggttatatggctctcccggtggctcagttccctgatatcacg
ccaccagtggtgagcgtcacagccagctacaccggcgccaatgcggaaaccgtcgaaaaa
agcgtagctgctccaattgaagctcaggtcaacggcgttgatgacatgatttatatgtcg
tcaagctcgtcagatactggcagctattcgctttcggtcacattcgaggttggaacggac
ccagatattgcttcggttaacgtgcaaaaccgcgttgctcaggccttgtccagcctaccg
gcagaagtaacatcgtcgggcgttgtgacacagaaaagttcgacaaacatgttgctggtt
gctactttgacctcgccaaacgccacctatgacgatctgtttttgtccaattacgctgag
atcaatattaaagatgcgctaagtcgcgttgccggagttggtaaggcagacatccttaac
agtcttagttactcgatgcggatttggatgaacccggaaaagatggccgctttgggcatt
accccgggggatctgatcaatgccgtaaaagagcagaaccttgaagtatctgctggccag
atcggtgcgccaccggttccaggtgatcaaacctttcagtatacaatcaagtccaaaggc
cgcctgacgtcagttgatgaatttggtgatattgtcatcagaacaggtgaggctggcagc
acggttcgcgttcgtgatgtggcgaccgtcgaattgggagcctcgaactacagtacgtca
gggttttacgatggaagcgaagccactatccttgctgtatatcaggccccaggagccaac
gccttggctgtctcagccgcagtattggccgaactagaccggctggcgatgtcgtttccg
gaagatgtgatttattccgttccgttcaacaccactgattttgtcgagcaatcgcttgcg
gatgttatttcgacactggttcttgcatttattctggttgtatcggtggtctttgtcttt
cttggctcatggcgcgcgaccattattcctgcggtggccattccggtgtcattgatcgga
acattcgcatttttgcttttgctggggatgtcgctcaatacgatttctttgtttgctttg
gttctagcaatcggcattgtggtagacgacgccattattgtggtggaaaacgtcgagcgt
ttgatcgccgaagaagggctgaacccaagcgacgcaactcgcaaggcgatggggcagatc
accgggccggtgattgcaacgaccttggttttattggctgtttttgtcccagttaccttt
atgccagggattagtggtgaattgttttcgcaattcgcggtgacgatttcggtggcagtt
gttatctcctccatcaatgcattaaccctatcgccagccctatgtggcctggtgctcaag
gcacgctccgggccgccaactgggttacttgccaaattcgaaagcgctatcgacattttg
cgaaacggataccttggtatcgtgggacggttgctcagatggccgtttctggcagtggcg
ctcgttcttgctatgtatgcaggaaccgggactctttttgggataacgtccaaagggttt
ttaccagccgaggacaatgggtatttgtttgttgacatccagctccccgatgctgcagcc
ctgggtcgtaccgaggtggtgaccaaacgggtcaatgaacaaatcgaacaaattccgggc
gtacacagcacaattctggtcaacggcttcagtatgttgaacggggccagcgccaacggt
gcgatgataatcatcaatttggacccatgggacgaacgtcaaacacctgatctgttcccg
acatccatattaaagcaagtatatggcctggcaaatgcagaagccgcagcgagcattgtt
gcgtttaacccgccgccgatttctggtcttggaatgtcagcaggcgttgaaatggaggta
cagcaaaccgctggtgggacgccacaggatctggcggctgcagtcgggtcgttggtctat
gctgccaaccagcggggcgaaattggccaatcctacaccacgtttcgggcgaatgttccg
caggttttcgtggatctggaccgggagaaagcgaaaactttggatgtctcaatctcagag
gtcttcctgaccatgcaggcccatttgggttcgtattacgtcaatgatttcaatctattc
ggccgcgtttatcgcgtgatggtacaggccgatggatcgtaccgagacaagattgaggat
atcggtaatctttatgtccgctcgcagagcggtaaaatggtcccgctttctactttaatc
gatgttgaaaacatccttgggccagttatcttgaaacgccacaatatgttccgttcagcg
actgtaacggctgtaccggccgctggattgtccaccggcgacgctatcggcgtcatgcaa
gaagaggccgcaaccgcattgccgccggggtatagttttgaatggaccggcacagcgcag
caacagctttcgtcctccggcctggttgttgttattcttggtatggcaattttgttcacc
tacctgtttcttgtggcacaatacgagagttggacaatgccaatcgcaattctgctttct
gtggtcgtagccatgtttggcgcagttgttgcagttgcggtcaccggaagtgacatcaac
ctctacacgcagattggcatgatcatgttgattggcatggcggcaaagaacggtattctc
attgtcgaatttgcgatggagcgccgtgccgcagggttgtcaatcaaagaggctgcacat
gaagctggccgccaacgcttcagggctgtaatgatgacagccttttccttcttgttagga
gttgtaccgcttctcatggcctcgggcgctggtgccgccagccaacaggctatcggggtt
gctgtttttggtggaatgttgatggccaccgttgttggggtcatcctgatccctgttctc
tacgcttttatgcaaggcttacgggaatgggttaaaggttccgccaagactgtttcccca
gccgaataa
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