Parasedimentitalea marina: EBB79_10805
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Entry
EBB79_10805 CDS
T05780
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sedi
Parasedimentitalea marina
Pathway
sedi01501
beta-Lactam resistance
sedi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sedi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EBB79_10805
01503 Cationic antimicrobial peptide (CAMP) resistance
EBB79_10805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sedi03036
]
EBB79_10805
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sedi02000
]
EBB79_10805
01504 Antimicrobial resistance genes [BR:
sedi01504
]
EBB79_10805
Chromosome and associated proteins [BR:
sedi03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
EBB79_10805
Transporters [BR:
sedi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
EBB79_10805
Antimicrobial resistance genes [BR:
sedi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EBB79_10805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_MFP_RND
BSH_RND
Beta-barrel_RND
RND-MFP_C
YknX_C
BSH_CzcB
Biotin_lipoyl
BSH_CusB
HH_EMRA
BSH_YknX
CzcB_C
HH_YBHG
HH_AAEA_pHBA
DUF5667
Motif
Other DBs
NCBI-ProteinID:
AZV78317
UniProt:
A0A3T0N2U1
LinkDB
All DBs
Position
complement(2199224..2200384)
Genome browser
AA seq
386 aa
AA seq
DB search
MQKLVSPLFSNRRFAAKIAVLSTALTLSVSPVALAQEAPPPKVSVMSAVTKPLRNSETFI
GRGEAIDKVNVIARVNGFLEEVLIADGANVQEGDLMFRIERSAYEATLEARKADLAKAEA
NLHLTSLELARKEELLSRGAVPEAERDTSRANEKVAEAEVRSAKAAIQQAELDLSYTEVH
APFSGRIGRVEVSVGDVVGPGSSSLVNLVREAPIYVSFALNEKQFVGVLQKVQQDAATEE
EQKRLIEVFVVLPNGDELDERGTIAFADNRIDPTTGAITVRAEFKNENRWIIDGSYLTVG
LESQKPVDRIVISQAAIQRDQQGTFVLVVDEQKMVQQRYIETGDVVGTSIIVNDGLKDGE
TVVVEGLQRIRPGAEVDPVLASQAGE
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaattagttagtccacttttttcaaatcgcaggtttgctgcaaaaattgcagta
cttagcactgcgttgactctcagtgtctcaccagttgctctggcgcaggaagcaccaccg
ccaaaagtttcagttatgtctgcggtgactaaacctttgcggaattccgaaaccttcatt
ggtcgaggtgaggcaattgacaaagtgaatgttattgcacgggtcaatggtttccttgag
gaggtattgatcgcggatggggcaaacgtccaagagggcgacctgatgtttcggatcgag
cgcagcgcctatgaggcaacgctggaagcacgtaaggctgacctggcaaaagctgaggcc
aatcttcacctgacgtcgttggaacttgctcgtaaagaggaactcctgtcgcgcggggca
gtccccgaagccgagcgtgatacgtcgcgggccaatgaaaaagtggccgaagccgaggtg
cggtcggccaaagcggcaattcaacaagccgaactggatttaagctataccgaagttcac
gccccgttttctggtcgcattggccgggtagaagtgagtgtgggtgacgttgtcgggcca
ggcagcagttcgctggtaaacctcgtacgggaagcaccgatttatgtgtcctttgcgctc
aacgaaaagcagttcgttggagttttacagaaggttcaacaggatgcggctacggaagaa
gagcaaaagcgactaatcgaagtgtttgtcgtgttgcccaacggggacgaattggacgaa
cgcgggactattgcttttgcggacaaccgaattgacccgaccaccggcgcgatcactgtg
agggctgaattcaaaaatgaaaatcgttggattatagatgggtcctatttgacagtgggc
ctggaatcccaaaagccagtcgatcgcattgttataagtcaggctgcgattcaacgagat
caacaaggtacatttgtgctggtggttgatgaacaaaaaatggttcagcaacgctatatt
gagacgggcgatgttgttggcaccagcattatcgtgaacgatggtcttaaagacggtgag
actgttgtcgttgaaggtctgcaacgtatccgtcccggtgccgaagtcgatccagtgctc
gccagccaggctggagaataa
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