Sedimentibacter sp. MB35-C1: RBQ61_04740
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Entry
RBQ61_04740 CDS
T10438
Name
(GenBank) D-alanine--D-alanine ligase family protein
KO
K18856
D-alanine---D-serine ligase [EC:
6.3.2.35
]
Organism
sedm Sedimentibacter sp. MB35-C1
Pathway
sedm01502
Vancomycin resistance
sedm02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sedm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RBQ61_04740
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RBQ61_04740
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
sedm01504
]
RBQ61_04740
Enzymes [BR:
sedm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.35 D-alanine---D-serine ligase
RBQ61_04740
Antimicrobial resistance genes [BR:
sedm01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
RBQ61_04740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_4
ATP-grasp_3
CPSase_L_D2
GARS_A
Motif
Other DBs
NCBI-ProteinID:
WMJ78241
UniProt:
A0AA51DD56
LinkDB
All DBs
Position
1038590..1039645
Genome browser
AA seq
351 aa
AA seq
DB search
MKTKLAILFGGKSDEYSVSLHSAAAIINNVPDEMFDVTLVGITQEGRWLLYEGSSDRIND
DSWHKGDLRPVLLSMGNEFRGLIKLNSNNTFEKIEIDCIFPVLHGRNGEDGTIQGLCQMT
GIPFVGCNMTSSAVCMDKEFTHIVCENAGIATAPYISAVNSSKLNIKKLYEEAYEKLSVP
MFIKPANNGSSLGISKVRNYDEFEKGVMEAFEYDNKLIIEKMIDGFEIGCAVVGNEDLII
GEVDEIETKNDFFDYVEKYSQHNSKIYCPARISDELKIQAKQIAEKTYIALGCKGMSRVD
MFVTPENQIYLNEINTIPGLTDLSRYPSMLKKIGIEYKDLIVKLVELAMEQ
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactaaattagcaatattgtttggaggtaaatccgatgaatactcggtttcattg
cactctgctgctgcaataatcaacaatgtccctgacgagatgtttgatgtcacccttgtt
gggataacacaggagggtcgatggcttttgtatgagggttcttctgacagaataaacgat
gactcatggcacaagggtgatttaagacctgtacttctcagcatgggcaatgaatttaga
ggactgataaagcttaattccaacaatacatttgaaaaaatagagatagactgcatcttc
ccagttcttcacggaagaaacggcgaagacggaacaattcagggactttgtcaaatgacg
ggaattccttttgtagggtgcaatatgacttcgtccgctgtgtgcatggataaggaattt
actcatattgtttgtgaaaacgctggaattgcaacagcgccgtatatatcggccgtaaat
tcaagcaaacttaatataaagaagctttatgaagaggcatatgaaaaactttctgttcct
atgttcataaaacctgcaaacaatggctcatctcttggaataagcaaagttaggaattat
gatgaatttgaaaagggtgttatggaagcatttgaatatgataataagcttataatagaa
aaaatgatcgatggatttgaaataggttgtgctgtagtagggaatgaggatttgataatt
ggtgaagttgatgaaatagaaacaaagaatgacttttttgattatgttgaaaagtatagt
cagcataattcaaaaatatattgtcccgcaagaatcagcgacgaacttaaaatacaagct
aaacagattgcagaaaaaacgtacattgcactgggctgtaaaggaatgtcaagagttgat
atgtttgttacgccggaaaatcaaatttatcttaacgaaatcaatacgataccgggttta
actgacctgagcaggtatccgtcaatgcttaagaaaataggtatagaatataaagacctg
attgtaaaactggtggaacttgcaatggaacaataa
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