Sedimentibacter sp. MB35-C1: RBQ61_17490
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Entry
RBQ61_17490 CDS
T10438
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
sedm Sedimentibacter sp. MB35-C1
Pathway
sedm01501
beta-Lactam resistance
sedm01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sedm00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RBQ61_17490
01503 Cationic antimicrobial peptide (CAMP) resistance
RBQ61_17490
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sedm02000
]
RBQ61_17490
01504 Antimicrobial resistance genes [BR:
sedm01504
]
RBQ61_17490
Transporters [BR:
sedm02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RBQ61_17490
Antimicrobial resistance genes [BR:
sedm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RBQ61_17490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF438
DUF5402
DUF6507
Motif
Other DBs
NCBI-ProteinID:
WMJ77334
LinkDB
All DBs
Position
complement(3603420..3606500)
Genome browser
AA seq
1026 aa
AA seq
DB search
MLSRFSVKKPVTITMMILIVIVLGVVSLSKLQIDLLPQMELPYVMVQTGYSGAGPEEIEN
LITKPVEQSVATVENIEGMISYSNEGSSLVLIQFAFGTDMDNAMLQLRENIDLIEGFLPD
GITSPIVAKLDPSAMPIIQMAVSSGGDLYNAQKMAEDIIAPRLERIEGTASASVSGGLEK
EIEVMLKEEALKGFNLSQAYVTQVIQAANINLPGGSVKKGSNELTVRTIGEFKSIEDIRN
LTIPLTTGGTVRLQDIADVKMADKDQSTITKMDGKEVVQISIMKQSDGNTVNVSKKVNKE
LEKIKKEYPDLNMISFFDQADYINFAIKNMIRTAILGGVFAVIVLMIFLRSFKTTLVIAL
SIPISVITTFVILFFTKITLNMMTIGGIALGIGMLVDNSIVVLENIYRNRSLGMDRTTAS
INGANEVSMAVTASSLTTVAVFLPIVFTGGLAATIFKDFALAIVIALMSSLVIALTLVPM
LSSKLVTVRNLESEETQEKKHGPLVVLYKTVLSWSLRHRFITIAASIGLFVASIAMLSSV
GAEFFPATDEGIINVSVSLPAGSETEQIDETLKEIQSSIQEIPEVVSIFTQAGSSGIMSM
GGSSGTGSMTVILSELNERDRSAKDISDEIRKMVKDVPGAEISVSEASMMMMGMSVGSIS
ISIKGDEIDTLKDIGDDFKEIIEKVEGTREVTTSYDDGIPQVQIKADRGIASQYGLTTAQ
IGSEVNNVLSGSTVTKFKVDGDELDVILKGDNIYGQSISLLEMLPIQTPQGGSVPLSEIA
EISIEKGPISIMRENQTRVLTVSGSVLGRDTQSVSTEIESLLSKYEMPNGYSYTFGGETE
QMEETFTDLAMVMLVAIILVYMIIAAQFESLLQPLSIMFSVPLALSGGFIGLFLAGLPLN
VIGIIGLIILVGIVVNNAIVLVDYINNRRNRGEDRTTAIMKAGPIRIRPIMMTALTTILG
LVPMAIGIGEGAELTRSMGIVVIGGLSLSTALTLVVVPIMYTIFDDIAAFFKRKFKKNKN
KTIERA
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgctttcaagattttcggttaaaaaacccgttacaattacaatgatgatattaattgtc
attgttttgggagtggtgtcattaagtaaattgcagatagatttgcttccgcagatggaa
ctgccgtatgttatggttcaaacaggatattccggcgcaggaccggaggaaattgagaat
ttaattacgaagccggtggaacagagtgtggctactgttgaaaatattgaaggtatgata
tcatattcaaatgaaggaagctcgttggtattgatccaatttgcatttggaacggatatg
gataatgcaatgcttcagcttagagaaaacattgatttgattgaaggattcctgccggac
ggtataacatcacccatagtagcgaaactggacccaagtgcaatgccaattattcagatg
gctgtttcaagcggcggagatctgtataatgctcaaaaaatggctgaggatattatagct
ccgcgccttgaaagaattgaaggaacggcttcagcttctgtttccggcggtcttgaaaaa
gagattgaggtaatgcttaaagaagaggcgctaaagggcttcaatcttagtcaggcctac
gtgacacaagtgattcaggcagcaaatatcaatttgccgggaggcagtgtcaaaaaagga
agtaatgaacttacagtcagaacaataggggagtttaaatcaatagaagacataagaaat
ctgacaattcctcttactacagggggaacagtaaggcttcaggatattgccgatgttaaa
atggctgataaggatcaatctactataacgaagatggacggcaaagaagtagttcagatt
tccattatgaagcagtcagacggaaatacagttaatgtttcaaaaaaagtaaacaaagaa
ttggaaaaaataaaaaaagaatatccggatttaaatatgatatccttttttgatcaggca
gattatataaattttgcaattaaaaatatgataagaacagcgattttaggtggagttttt
gcggtaatcgtacttatgatatttttaagaagctttaaaacgacacttgtaattgcgctt
tctatacctatttccgtaattactacatttgttattttattctttacaaagataacactc
aatatgatgaccataggtgggattgctctcggaataggtatgctggtagataactctatt
gttgttcttgagaatatatatagaaacagaagcctgggtatggacagaacaacggcgtct
ataaacggtgcaaatgaggtttcaatggcagtaacagcttcttcactcaccactgtagca
gttttcctgccgattgtatttacgggagggttggctgcaaccatattcaaggactttgct
cttgccatagtaatagctcttatgagttcattggtcattgcacttacactggttcctatg
ttgtcatccaaactcgttacagttagaaaccttgaatctgaagaaactcaggaaaaaaag
catggaccgctggttgtgctgtacaaaactgttttaagctggagtttaaggcatcgcttt
attacaatagcggcgagtatagggctgtttgttgccagcattgctatgctttcatcggtg
ggagcggaattttttcctgccacagacgaggggataataaatgttagtgttagccttcca
gcaggatctgagacagaacagattgatgagactctaaaggaaatccagtcatcaatacag
gaaataccggaagttgtttcgatatttactcaggcgggcagctccggcataatgagtatg
ggaggtagttcaggtaccggttctatgactgttattctgagcgagctgaatgagagagac
agaagtgcaaaagatataagcgatgagattcgaaaaatggttaaggatgtccccggagcc
gagataagtgtttcggaagcatcaatgatgatgatggggatgagtgttggttccataagt
atcagcatcaagggagacgaaatagatactcttaaggatattggagatgatttcaaggaa
ataatcgaaaaagttgaaggaacaagagaagtaactacaagttatgatgacggaataccg
caggttcagataaaagctgacaggggcatagcttctcagtatggactgactacagcacag
ataggttcggaagtaaataatgttttatcagggtcaaccgttacgaagtttaaagttgac
ggtgacgagctggacgttatattaaagggagataatatatacggacaaagtatttctttg
cttgagatgcttccaatacaaacaccgcagggaggaagtgtaccgctttcggaaatagca
gaaatcagcattgaaaaaggtcctatcagcattatgagagaaaatcagacaagagttctg
acagtaagcggaagtgttttgggaagagatactcagtctgtttcaacagaaatagaaagc
ttgctcagcaagtatgaaatgccaaacggatacagctatactttcggaggagagacggag
cagatggaagagacatttacagatttggcaatggttatgcttgttgcaatcattcttgtg
tacatgattatcgcagcgcagtttgaatcgctccttcagccattgtccataatgttttcg
gttccacttgcattgtctggaggatttatagggctgtttttagcaggtcttcctctgaat
gtaataggaataatcgggttgattattcttgtaggtatagtagttaacaatgccatagtt
cttgtagactatataaataaccgaagaaacaggggtgaagacagaacaaccgctataatg
aaagcaggacccataagaataaggcctattatgatgactgcccttacgacgatactgggg
cttgtacctatggcaataggtataggagaaggagcggaacttaccagatccatgggtatt
gtagtaatcggaggactttcattatcaactgcgctgacattggttgttgtaccgataatg
tatacaatatttgatgatatagcggcatttttcaaaagaaaatttaagaaaaacaaaaat
aaaacaatagagcgggcataa
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