Sedimenticola thiotaurini: AAY24_01480
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Entry
AAY24_01480 CDS
T03943
Name
(GenBank) RND transporter
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
seds
Sedimenticola thiotaurini
Pathway
seds01501
beta-Lactam resistance
seds01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
seds00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AAY24_01480
01503 Cationic antimicrobial peptide (CAMP) resistance
AAY24_01480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
seds03036
]
AAY24_01480
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
seds02000
]
AAY24_01480
01504 Antimicrobial resistance genes [BR:
seds01504
]
AAY24_01480
Chromosome and associated proteins [BR:
seds03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
AAY24_01480
Transporters [BR:
seds02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
AAY24_01480
Antimicrobial resistance genes [BR:
seds01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
AAY24_01480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
HH_MFP_RND
YknX_C
Beta-barrel_YknX
HH_AprE
DUF4131
BSH_CzcB
HH_EMRA
BSH_RND
RND-MFP_C
Beta-barrel_RND
HH_CzcB
OEP
CzcB_C
OppC_N
YscO
Motif
Other DBs
NCBI-ProteinID:
AKH19232
UniProt:
A0A0F7JUC0
LinkDB
All DBs
Position
complement(342465..343646)
Genome browser
AA seq
393 aa
AA seq
DB search
MRRTTGLFILTLLIVLALFGWLLSQRLIEQHQTGDSSVKQTQPIPVEVAAVERGHIERQR
TFSGTLQAQAEIVVAPKVSGRILQLMADLADPINQGQVVARLDNDEYVQDVRQAEAELAV
ARANLAEAQSQLKIAERELERIEKLRQRGVSSESQRDAAKADQLTKQAHVQVTRAQLTRA
EAALESARIRLGYTTVTADWRGDNDQRIVAERYVDEGETVSANAPLLRIVELDPITVVFF
ITERDYALLQQGLPASLTTDAYPGESFSGTIERIAPVFRESTRQARVEVQVDNPLLKLKP
GMFVRVTVTLEKMDNATIVPEQALVTRDGNSGVFLVSDDGTRVSWQPVTVGIRQDDRVQV
NGQPLTGEVVILGQQLLDDGSLIRVAGKQTRTL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgaacaaccgggctattcatactgacactgctgatcgtgcttgccctcttcgga
tggctactttcccaacgtttgatagaacagcaccagaccggcgactcctcggtcaagcaa
acccagccgattccggtcgaggtcgcagcggttgagcggggtcacatcgaacggcagcga
accttttccggcaccctccaggcccaggcggagatcgtcgtagccccaaaggtgagcggc
cgaatcctgcaactcatggcggacctggctgatcccatcaaccaggggcaggtggtagca
cggctggataatgacgaatatgtacaggatgtgcggcaggcggaagccgaactggcagtg
gcccgggccaatttggccgaggcccagagccagctgaagatcgccgaacgggagctggaa
cggatagaaaaactgcgccagcggggggtcagctcagaatcccagcgggatgccgccaag
gccgatcagctgaccaaacaggcccatgtccaggtcacccgtgcacaactgacccgggcc
gaggcggcactggaaagtgcccgcattcgactgggctacaccacagtcaccgccgactgg
cgaggtgacaacgaccaacggattgtcgcagagcgctatgtggacgagggtgaaactgtc
agcgccaacgccccactactgcgcattgtggagctggatccgatcaccgtcgtattcttc
atcactgaacgggattatgctctgttgcagcaggggctgcccgccagcctgaccaccgac
gcctatccgggtgagtccttcagcggcacaattgagcgcatcgccccggtgtttcgtgaa
agcacccggcaggcccgggttgaagtgcaggtggacaaccccctgctgaaactcaaaccg
ggtatgttcgtacgggtcactgtgaccctggaaaagatggacaatgccaccatcgtcccg
gagcaggccctggtcacccgggatggcaacagcggtgtgttcctggtctccgacgatggc
accagggtcagctggcaaccggtcaccgtcggtatccggcaggacgaccgggtgcaggtc
aatggacagccgctcacgggagaagtggtaatcctgggccagcagctgctggatgacggc
tcccttatccgggtggcgggaaaacagacgaggacactatga
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