Sedimentibacter sp. zth1: JYG23_06375
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Entry
JYG23_06375 CDS
T07110
Name
(GenBank) M15 family metallopeptidase
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
sedz
Sedimentibacter sp. zth1
Pathway
sedz00550
Peptidoglycan biosynthesis
sedz01100
Metabolic pathways
sedz01502
Vancomycin resistance
sedz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sedz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JYG23_06375
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JYG23_06375
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
JYG23_06375
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sedz01002
]
JYG23_06375
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sedz01011
]
JYG23_06375
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
sedz01504
]
JYG23_06375
Enzymes [BR:
sedz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
JYG23_06375
Peptidases and inhibitors [BR:
sedz01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
JYG23_06375
Peptidoglycan biosynthesis and degradation proteins [BR:
sedz01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
JYG23_06375
Antimicrobial resistance genes [BR:
sedz01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
JYG23_06375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
Peptidase_M15_2
VldE
Peptidase_M15_4
ETRAMP
Motif
Other DBs
NCBI-ProteinID:
QSX07011
LinkDB
All DBs
Position
complement(1265847..1266659)
Genome browser
AA seq
270 aa
AA seq
DB search
MKIFLLVCLILVLVFINACGDRGTKDNNIVIKDSDRDTNNVNVGSNDNKDDNENEVVGSN
DSKDDEAVVETFLDENNVVTNVESIEVVVNKQRNLDEKYVPEDLVTLTDVPTCLANPEVN
QLKKEAADALTDLFEKAKEELDIQLYARSGYRSYNTQVSLYNGYVTNHGQEAADTFSAKP
GQSEHQTGLAMDITSETVNLQLTEDFGDTDEGKWINENSYKYGFIVRYPKGKESITGYMY
EPWHIRYIGKELAKKVYESELTLDEYLFGE
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatatttttattagtatgcttaatattagttttagtttttataaatgcatgtgga
gataggggtacaaaagataacaatatagttattaaggacagcgatcgagatacaaataat
gtaaatgtaggaagtaatgataataaagacgataatgagaacgaagttgtaggtagtaat
gatagtaaagatgatgaagctgtagttgaaacattcttagatgaaaataatgtggttacc
aatgttgaatcaattgaagttgtagtaaataaacagcgtaatttagatgaaaaatatgta
cctgaagatttggttaccctaactgatgtaccaacatgtttagcaaatcctgaggttaat
cagttaaaaaaagaggcagctgatgcgttaacagatctttttgaaaaggcaaaagaggaa
ttagatatacagctttatgctaggtcaggatataggtcgtataatacacaagtatcatta
tataatggatatgttactaaccatggacaagaagccgctgatacatttagtgcaaaacca
ggtcaaagtgagcatcaaaccgggcttgctatggatataactagtgaaactgttaattta
cagttaactgaagattttggtgatactgatgaaggcaaatggattaatgaaaattcatat
aaatatggttttatagtaagataccctaaaggtaaagaaagtataacaggatatatgtat
gaaccttggcatataagatatataggtaaggaacttgccaaaaaggtttatgaaagtgaa
ttaactcttgacgaatatttatttggagaatag
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