Sedimentibacter sp. zth1: JYG23_08290
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Entry
JYG23_08290 CDS
T07110
Name
(GenBank) isoleucine--tRNA ligase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
sedz
Sedimentibacter sp. zth1
Pathway
sedz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sedz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JYG23_08290
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sedz01007
]
JYG23_08290
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sedz03016
]
JYG23_08290
Enzymes [BR:
sedz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
JYG23_08290
Amino acid related enzymes [BR:
sedz01007
]
Aminoacyl-tRNA synthetase
Class I (U)
JYG23_08290
Transfer RNA biogenesis [BR:
sedz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
JYG23_08290
Prokaryotic type
Other AARSs
JYG23_08290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
DUF5915
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1f
Zn_ribbon_8
Zn_ribbon_3
tRNA-synt_1e
DUF2683
Motif
Other DBs
NCBI-ProteinID:
QSX04707
UniProt:
A0A974X7S6
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All DBs
Position
complement(1648459..1651578)
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AA seq
1039 aa
AA seq
DB search
MKLFKDISKLPYNEYEKEMSNYWENIDLLHQAVETRKDKQQFVFYEGPPTANGRPGIHHV
IARTLKDSVCRFKTMEGYQVKRKAGWDTHGLPVEIEVEKKLGLKNKQDIENYGIDKFNEN
CRESVFTYSGLWRQMTERMAYLIDLDNPYITLDNNYIESVWWILNKFFKEGLMYEGHKIL
PYCPRCGTGLASHEVAQGYEEIKTATAFVKFKLVGKNEYFLAWTTTPWTLASNVALTVHA
DMEYVKIKLADTEDKKGDVLYLAKSLLEKVIKVDYEILEEMKGKDLEFVEYEQIMPFVKA
DKKAFFVTCADYVTAEDGTGIVHTAPAFGEDDYNTGKRYNLPVLQPVDDTGKFTQTPWKG
MFVMDADKDILIWLKEQGKLFKKETVFHNYPHCWRCKTPLLYYAKPSWYIQMTKLKDNLV
ENNKTVEWYPDFVGEKRFGNWLENVNDWAVSRSRYWGTPLPIWRCECGHVDSIGSRKELA
ERAIENIDENIELHRPFVDDVHITCPHCGKPMTRVKDVIDCWFDSGSMPFAQQHYPFENK
ENFDEMFPADFICEGIDQTRGWFYSLLAISTFVKGVSPYKRVLVNDLILDKFGKKMSKSK
GNGVDPFQLFDKYGADALRWYLLHVSPAWSPTKFDEDGLKEVLSKFFGTIKNVYTFFALY
ANTDNVDPREFFVEIKDRPELDRWIISKYNNLVKYVKECMDVFDLNKVVRAIQDFINEDL
SNWYIRRSRRRFWATELTEDKKSVYVTTYEILVGVSKLVAPFAPYIAEELYRDLTGEKSV
HLADYPIANEEVIDLNVEKRMDLVRDLVKLGRASRETTKIKVRQPIQKIYIDGRYEALIS
DMTPLIMEELNVKEVLFEQNLNQYINFTIKPNFKTCGPKLGKDVKVFAQELLKADTKEII
STVQAGNVYNMAVSGNEIEITEDMLDIRIAAKEGYDVEMSNNLFVIIDTNLTKELIDEGY
AREFVSKIQQMRKTNGYEMMDNIKIFFNGNEEISNAVDIFTDFIKSETLAIEITKTDDTS
FEVQNLNGIETGIKLEKVN
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgaaattatttaaagacatatcaaaattaccatataacgaatatgaaaaagaaatgtca
aattactgggaaaatatagatttactacatcaagcagttgaaacaagaaaagataaacag
cagtttgttttttatgaaggaccaccaactgccaatggtagaccgggaattcaccatgtt
atagcaagaactttaaaagattctgtatgccgtttcaaaacaatggagggctatcaggta
aaaagaaaagccggatgggatactcatggacttcccgttgaaatcgaagttgaaaaaaaa
ttaggacttaaaaacaaacaagatatagagaattatggcatagataaatttaatgaaaat
tgtagagagtcagtattcacatatagcggattatggagacaaatgactgagcgtatggca
tatctaattgacttagataatccatatatcacacttgacaacaactatatagaatcagtt
tggtggatattgaataagttctttaaagagggattaatgtatgaaggacataaaatatta
ccttactgtcctagatgtggaacaggtcttgcatctcatgaagttgcacaaggctatgag
gaaataaaaactgcaacagcatttgttaagtttaaattagttggaaaaaatgaatatttc
ttagcatggacaacaacaccttggacacttgcttcaaacgttgcacttacagtacatgct
gatatggaatatgttaaaattaaattagcagatacagaagataaaaaaggcgacgtatta
tatcttgccaaatcattacttgaaaaagttataaaagtagattatgaaatacttgaagaa
atgaaaggtaaagacttagagtttgttgagtatgagcaaattatgccttttgtaaaagct
gataaaaaagctttttttgtaacatgtgcagattacgttacagctgaagatggtactggt
atagttcatacagctcctgcatttggtgaagatgactataacacaggaaaaagatataat
ttaccagttttacaaccagttgatgataccggtaagtttacacaaacaccttggaaaggt
atgtttgttatggatgctgataaagatatcttaatttggttaaaagagcaaggcaagtta
tttaaaaaagaaactgtatttcacaattatcctcactgctggagatgtaaaactccactt
ttatactatgcaaaaccaagctggtatattcaaatgacaaaattaaaggataatcttgtt
gaaaacaacaaaacagttgaatggtatcctgattttgttggagaaaaaagatttggtaac
tggttagaaaatgtaaatgattgggctgtatcaagaagtagatactggggaacaccactt
ccaatttggagatgcgaatgcggtcatgtagatagtataggttcaagaaaagaattagct
gaaagagctatagaaaacatagatgaaaatatagaattgcacagaccgtttgttgatgat
gttcatataacttgtcctcattgtggaaaaccaatgacaagagttaaagatgtaattgac
tgttggtttgacagtggttcaatgccatttgctcaacagcactatccattcgaaaacaaa
gaaaactttgatgaaatgttcccagcagattttatctgtgaaggtattgatcaaactcgt
ggatggttctactcattacttgcaatatcaacatttgtaaaaggcgtatcaccatataaa
agagttttagtaaatgacttgatactagataaatttggcaagaaaatgtctaaatcaaaa
ggaaacggtgtagatccatttcaattattcgataaatatggagctgatgctttaagatgg
tacttattacatgtatcaccagcatggtcaccaacaaaatttgacgaagacggattaaaa
gaagttttgagtaaattctttggaactatcaaaaatgtttatacattctttgcactatat
gcaaataccgataatgtagatccaagagaattctttgttgaaataaaggatagaccggag
cttgatagatggataatttctaaatacaacaatttagttaagtatgttaaagagtgcatg
gacgtatttgacttgaataaagtagtaagagcaattcaagactttattaatgaagattta
tcaaattggtatattagacgttcaagaagaagattttgggcaactgaattaacagaagat
aaaaaatcagtatatgtgacaacttatgaaattcttgttggagtatcaaaacttgtagct
ccatttgctccatatatagctgaagaattatatagagatttaactggagaaaaatcagtt
cacttagctgattatccaatagctaatgaagaagtaatagacttgaatgttgaaaagaga
atggaccttgtaagagatttagttaagcttggtagagcgtcaagagaaactactaaaatc
aaggttagacaaccaattcaaaaaatctatatagatggtagatatgaagcattaatttct
gatatgacaccacttattatggaagaattgaatgtgaaggaagttttatttgaacagaac
ttaaatcaatatataaactttactataaaaccaaacttcaaaacttgcggacctaaatta
ggtaaagatgtaaaagtatttgcacaagaactattaaaagcagatacaaaggaaataatc
tctacagttcaagcaggtaatgtatataacatggcagttagtggcaatgaaattgaaata
acagaagatatgttagatataagaattgctgcaaaagagggttatgatgttgaaatgtct
aacaatttatttgttattattgatactaacttaactaaagagcttatagatgaaggatat
gcgagagagtttgtatctaagattcagcaaatgagaaagactaatggatatgaaatgatg
gataatattaaaattttcttcaatggaaatgaagaaatatctaatgcagtagacatattt
acagatttcatcaaatctgaaacattggcaatagaaataacaaaaactgatgatacaagt
ttcgaggttcaaaacttaaatggtatcgaaacaggtataaaacttgaaaaagtaaactaa
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