Sedimentibacter sp. zth1: JYG23_12610
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Entry
JYG23_12610 CDS
T07110
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
sedz
Sedimentibacter sp. zth1
Pathway
sedz01501
beta-Lactam resistance
sedz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sedz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JYG23_12610
01503 Cationic antimicrobial peptide (CAMP) resistance
JYG23_12610
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sedz02000
]
JYG23_12610
01504 Antimicrobial resistance genes [BR:
sedz01504
]
JYG23_12610
Transporters [BR:
sedz02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JYG23_12610
Antimicrobial resistance genes [BR:
sedz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JYG23_12610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
QSX05506
UniProt:
A0A974XG28
LinkDB
All DBs
Position
2636677..2639850
Genome browser
AA seq
1057 aa
AA seq
DB search
MLSKFSVKKPYTVVVAIVLVLILGVVSYTKMSIDLIPSVNLPYAVVTTTYLGATPEKVEQ
VVTSPLEQVMASVNNIKNINSISAENMSIIILEFNEDTNMDSATIELRENLDMVSSFFPD
EIGNPAIMKINPDMMPIMVMSASIEGMSDEESATYIEDKLVPLIKSVEGVASVSTTGLVE
NMIDVTLSKEKIANVNADISEFYAKKAMEMMVGNQIIDIEQSQEQSQMPSNQQGMQKMEI
TKELVSNILKGQNFAMPSNSIASEDGTTQLLRVGDKLQSIKELENLVIMSIPEYGSIKLS
DVANLNTYDNLDSMYSKINGNYAIMLAMQKQPHYSTADVANNIQKKADEIIIDHPNIRFD
VLMNQGQYVNVMIERIISNLLLGSLFAVIILYLFLRKIRPTLIVGASIIISVIGAFVLMY
FSGITLNMISMGGLALGVGMLVDNSIVVIENIYRMRSEGKSAKDAAIEGAREVSGAITAS
TLTTVIVFLPIVFTQGITRQLFTDMALTIGFSLLASLVVALTLVPAASSVMLKSNIESKK
TIIDKLVNVYTKALNKSLKYNWVSLILAVALLIVSITLAFSSNVSLFPSMDSGNITVSVN
MPDTFSKQDRFEALDKLNDTLLSIDDIQTVGIMDTTNSTENSNAFMNMVGSGTTIYVLLD
EDREASTENIVETIRNNTKDFNFEVTVSNSNMDMSMLTSGQIVINAYGRELDELREIAKN
IGMEISSIKGVTEVDNGLGKVGQDMRVVVDKDKAIEKGLTVAQVYVAISDAIKSDSVTTT
LTAEDFDYSVYVKDDRDINITSEKIQDITIQSPMGDSVKIGDISDIENSEGFSAIRRKGQ
ERYVSITASLEEGYNIKEINSLIEEKLDKLDLPKGCRFEISGEMESIKDAFNDLFLMLAL
AIVFIYLVMVAQFQSLLSPFIVMFTIPLAFTGGFLALYICNMPVSIISLIGLIVLVGIVV
NNGIVFVDYTNQQMNKGYNKKEALLIAAKNRLRPILMTALTTIIALIAMAFDRSSGAEIL
RPMAITTIGGMIYSTILTLFIIPAMYYIFKRDKKENR
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgttatcaaaattcagtgtaaaaaaaccatatacggttgtagttgcaattgttttggtc
ttaatacttggtgtagtatcatacacaaaaatgagtattgatttaataccaagtgtaaac
ttaccatatgcagtagtaacaacaacatacctaggagcaacaccagaaaaagtggagcaa
gtagttacatcaccattagaacaggtgatggcttcagttaataacattaaaaatattaat
tctatttcagcagagaatatgtcaattattatattagagtttaatgaagacactaatatg
gattctgctacaattgaattaagagagaatttggatatggtttcttcattttttccggat
gaaataggaaaccctgcaataatgaaaattaaccctgatatgatgcctataatggttatg
tcagcatcaatcgaaggaatgtctgatgaagaatcagctacgtacattgaagacaaatta
gtaccattaattaaaagtgttgagggtgtagcttcagtatcaactactggtttggttgaa
aatatgatagacgttacattatcaaaagaaaaaatagctaatgtaaatgctgatataagt
gaattttatgcaaaaaaagctatggaaatgatggttggaaatcaaataattgatattgag
caatcacaagaacagtctcaaatgccatcaaatcaacaaggcatgcagaagatggaaatt
actaaagaattagtaagcaatatactgaaaggacaaaattttgcaatgccttctaattct
atagcttcagaagatggaacaacacaacttttaagagttggtgataaacttcaaagtata
aaagaactagaaaacttagtaattatgagtattccagagtatggttctatcaaattgtca
gatgtagcaaacctaaatacatatgataatttagattcgatgtactcaaaaataaatggc
aattatgctataatgttggctatgcaaaagcaaccacactattcaacagcagatgtcgct
aacaatattcagaaaaaagctgatgaaattattatagatcaccctaatattaggtttgat
gtattaatgaatcaaggacaatatgtaaatgtaatgattgaacgtataatttcaaatctg
ttgcttggttcattgtttgcagttataatcttatatttattcttaaggaaaataagacca
acgttaatagttggtgcatcaataataattagtgttataggtgcttttgtgctaatgtat
ttttcaggaataacattgaatatgatttcaatgggtgggctagcgcttggagtaggtatg
ttagtagataactccatagttgttattgaaaatatttatcgtatgcgttcagaaggaaaa
agtgcaaaggatgctgctatagaaggggcaagagaagtatcaggtgcaattactgcatca
actttgacaacagttatagtgtttttacctatagtatttacgcaaggtataacaagacag
ttgtttacagatatggcacttacaataggtttttcactacttgccagccttgtagtagca
ttaacattagttccagctgcatcaagtgttatgcttaaaagcaatattgagtctaaaaaa
acaatcattgataaattagttaatgtatataccaaagctctaaataaatcacttaaatat
aattgggtgtcattgattttagcagtggctttattgatagtaagcattacattggcattt
tcatctaatgttagcttatttccatcaatggatagtggaaatataacagtatctgtaaac
atgccagatacattttcaaaacaagatagatttgaagcactagataagcttaatgatact
ttattgtcaatagatgatatacaaacggttggtatcatggatacgacaaactctacagaa
aattcaaatgcttttatgaatatggttggttcaggaactactatatatgtattgcttgat
gaagatagggaagcatcaacagagaatattgtagaaacaattagaaataatacaaaagac
ttcaattttgaagtaacagttagcaattcaaatatggatatgtcaatgctaacatctggt
caaatagttataaatgcatacggtagagagcttgatgaattaagagaaatagcaaaaaat
ataggaatggaaatcagctctataaaaggcgtaactgaggttgataacgggttaggcaag
gtcggtcaagatatgagagttgtagtagataaagataaagccatagaaaaaggacttaca
gttgcgcaggtttatgttgcaataagcgatgctataaaatctgattcagttactactaca
ttaacagcagaagattttgattatagtgtatatgtcaaagacgatagagacataaatata
acatctgaaaaaatacaagacataacaattcaatcaccaatgggagatagcgtgaaaatt
ggagatatatcagatatagaaaattctgaaggattttcagcaatcagaagaaaaggtcaa
gaaagatatgttagtattacagcttcattagaagaaggttataatataaaagaaattaat
agtttaattgaagaaaaacttgataaactagatttacctaaaggatgtagatttgagata
tcaggtgagatggaatcaatcaaagatgcatttaatgatttatttttgatgctagcattg
gcaatagtatttatataccttgtaatggtagcacaatttcaatcattattatcgccattt
attgtaatgtttactataccacttgcattcacaggaggattcttagcattgtatatatgc
aatatgcctgtaagcatcatatctttgataggattgatagtcctagtaggtatagttgta
aacaatggtatagtatttgttgactatactaatcaacagatgaacaaagggtataacaaa
aaagaggcattgctaattgcagcaaaaaatagattaagaccaatacttatgacagcatta
acaactattatagccttaattgctatggcatttgacagaagtagtggagcagaaatactt
agaccaatggctataacaacaataggtggaatgatttactctactatattaacattattc
atcataccagcgatgtactatatatttaaaagagataaaaaagaaaatagataa
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