KEGG   Salmonella enterica subsp. enterica serovar Gallinarum 287/91: SG1892
Entry
SG1892            CDS       T00770                                 
Symbol
ycfD
Name
(GenBank) conserved hypothetical protein
  KO
K18850  50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
Organism
seg  Salmonella enterica subsp. enterica serovar Gallinarum 287/91
Brite
KEGG Orthology (KO) [BR:seg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:seg03009]
    SG1892 (ycfD)
Enzymes [BR:seg01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.47  [50S ribosomal protein L16]-arginine 3-hydroxylase
     SG1892 (ycfD)
Ribosome biogenesis [BR:seg03009]
 Prokaryotic type
  ribosomal protein modification factors
   SG1892 (ycfD)
SSDB
Motif
Pfam: JmjC_2 WHD_ROXA Cupin_1 Cupin_2 AraC_binding
Other DBs
NCBI-ProteinID: CAR37744
UniProt: B5RB73
LinkDB
Position
1954325..1955446
AA seq 373 aa
MEYQLTLNWPDFLERHWQKRPVVLKRGFSNFIDPLSPDELAGLAMESEIDSRLVSHQDGK
WQVSHGPFESYDHLGESNWSLLVQAVNHWHEPTAALMRPFRALPDWRIDDLMISFSVPGG
GVGPHLDQYDVFIIQGTGRRRWRVGEKLQMRQHCPHPDLLQVDPFEAIIDEELEPGDILY
IPPGFPHEGYALENAMNYSVGFRAPNSRELISGFADYVLQRELGNTYYSDPDMPSRKHPA
DILPQEMDKLRNMMLDLINQPAHFQQWLGEFLSQSRHELDIAPPEPPYQPDEIYDALKQG
EVLVRLGGLRVLRIGDEVYANGEKIDSPHRPALEALASHIALTAENFGDALEDPSFLAML
AALVNSGYWFFEG
NT seq 1122 nt   +upstreamnt  +downstreamnt
atggaataccaattaactcttaactggcccgactttcttgaacgccactggcaaaaacgc
ccggtggtcttaaaacgtgggtttagcaactttatcgatccgctctcgccggatgagctg
gcggggctggcgatggaaagcgaaatcgacagccgactcgttagccatcaggatggcaaa
tggcaggtcagccatggccctttcgaaagctacgatcatctgggtgagagcaattggtcg
ctgctggtacaggcggtaaaccactggcacgaacccaccgccgcgctgatgcgcccgttc
cgcgctctgccggactggcgtatcgacgatctgatgatctccttttccgttcccggcggc
ggcgttggcccgcatctggatcagtatgatgtgtttattattcagggaaccggtcgccgt
cgctggcgcgtgggcgaaaagctgcaaatgcgtcagcactgcccgcatcccgacctgtta
caagtcgatccgttcgaggccattattgatgaagagctggagccgggcgacattctgtat
attccgccaggattcccgcatgaaggctatgcgctggaaaacgccatgaactattcggtc
ggttttcgcgcgcccaatagccgtgagctgatcagcggttttgccgattacgtcctgcaa
cgggagttgggcaatacatactacagcgatccggatatgccgtcccgcaagcatccggcg
gatatcctgccgcaggagatggataaactgcgtaatatgatgctcgatttgatcaatcaa
cccgcgcatttccaacagtggcttggcgagtttctctctcagtcacgccacgaactggat
attgcgccgccggagccgccgtatcagcctgatgaaatttacgatgccttaaagcaaggc
gaggtattagtacgtctcggcgggcttcgcgtgttgcgtatcggcgatgaggtctatgcg
aatggcgaaaaaatagactctccgcatcgccccgctctggaggcgctcgccagtcatatt
gcactgaccgctgaaaacttcggcgatgcgctggaagacccgtccttcctcgcgatgctg
gcggcgctggtgaatagcggatactggtttttcgaaggataa

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