Salmonella enterica subsp. enterica serovar Paratyphi C: SPC_2278
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Entry
SPC_2278 CDS
T00862
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sei
Salmonella enterica subsp. enterica serovar Paratyphi C
Pathway
sei03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SPC_2278 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sei03400
]
SPC_2278 (nth)
Enzymes [BR:
sei01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SPC_2278 (nth)
DNA repair and recombination proteins [BR:
sei03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SPC_2278 (nth)
Prokaryotic type
SPC_2278 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
P_gingi_FimA
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ACN46395
UniProt:
C0Q512
LinkDB
All DBs
Position
2337009..2337644
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AA seq
211 aa
AA seq
DB search
MNKAKRLEILTRLRDSNPHPTTELNFTSPFELLIAVLLSAQATDVSVNKATAKLYPVANT
PAAMLELGVEGVKSYIKTIGLFNSKAENVIKTCRILLDKHNGEVPEDRAALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPNEFKVDCHHWLI
LHGRYTCIARKPRCGSCLIEDLCEYKEKVDI
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagcaaaaaggctggaaattctgacgcgcctgcgcgacagcaacccgcacccc
acaacggaactcaatttcacgtcgccatttgagttgctgattgccgtgttgctttccgcg
caggcaaccgacgtcagcgtgaacaaggctaccgccaaactttacccggtcgccaataca
ccagccgcgatgctggaactgggcgtagaaggcgtgaaatcctatatcaaaaccatcggt
ttatttaacagtaaagcggaaaacgtgattaagacctgccgtattttactggacaagcat
aatggcgaagtgccggaggatcgggcggcgctggaagcgcttcccggcgtggggcgtaaa
accgctaacgtggtgctaaataccgccttcggctggccgaccatcgccgttgatacgcat
atatttcgtgtatgcaaccgaacacaattcgcgccgggtaaaaatgtcgagcaggtagaa
gagaagttgctgaaagtggtgccgaatgagttcaaagtggactgccatcactggttaatt
ttgcatggccgctatacctgtatcgcccgaaaaccccgctgcggctcctgcctcattgaa
gatctttgcgaatacaaagaaaaagtcgatatttga
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