KEGG   Salmonella enterica subsp. enterica serovar Typhimurium UK-1: STMUK_1197
Entry
STMUK_1197        CDS       T01743                                 
Symbol
ycfD
Name
(GenBank) putative cytoplasmic protein
  KO
K18850  50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
Organism
sej  Salmonella enterica subsp. enterica serovar Typhimurium UK-1
Brite
KEGG Orthology (KO) [BR:sej00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sej03009]
    STMUK_1197 (ycfD)
Enzymes [BR:sej01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.47  [50S ribosomal protein L16]-arginine 3-hydroxylase
     STMUK_1197 (ycfD)
Ribosome biogenesis [BR:sej03009]
 Prokaryotic type
  ribosomal protein modification factors
   STMUK_1197 (ycfD)
SSDB
Motif
Pfam: JmjC_2 ROXA-like_wH Cupin_1 Cupin_2 AraC_binding
Other DBs
NCBI-ProteinID: AEF07103
UniProt: A0A3Z6NVL0
LinkDB
Position
complement(1274189..1275310)
AA seq 373 aa
MEYQLTLNWPDFLERHWQKRPVVLKRGFSNFIDPLSPDELAGLAMESEIDSRLVSHQDGK
WQVSHGPFESYDHLGESNWSLLVQAVNHWHEPTAALMRPFRALPDWRIDDLMISFSVPGG
GVGPHLDQYDVFIIQGTGRRRWRVGEKLQMRQHCPHPDLLQVEPFEAIIDEELEPGDILY
IPPGFPHEGYALENAMNYSVGFRAPNSRELISGFADYVLQRELGNTYYSDPDMPSRKHPA
DILPQEMDKLRNMMLDLINQPAHFQQWLGEFLSQSRHELDIAPPEPPYQPDEIYDALKQG
EVLVRLGGLRVLRIGDEVYANGEKIDSPHRPALEALASHIALTAENFGDALEDPSFLAML
AALVNSGYWFFEG
NT seq 1122 nt   +upstreamnt  +downstreamnt
atggaataccaattaactcttaactggcccgactttcttgaacgccactggcaaaaacgc
ccggtggtcttaaaacgtgggtttagcaactttatcgatccgctctcgccggatgagctg
gcggggctggcgatggaaagcgaaatcgacagccgactcgttagccatcaggatggcaaa
tggcaggtcagccatggtcctttcgaaagctacgatcatctgggtgagagcaactggtcg
ctgctggtacaggcggtaaaccactggcacgaacccaccgccgcgttgatgcgcccgttc
cgcgctctgccggactggcgtatcgacgatctgatgatctccttttccgttcccggcggc
ggcgttggcccgcatctggatcagtatgatgtgtttattatccagggaaccggtcgccgt
cgctggcgcgtgggcgaaaagctgcaaatgcgtcagcactgcccacatcccgacctgtta
caagtcgaaccgttcgaggccattattgatgaagagctggagccgggcgacattctgtat
attccgccaggattcccgcatgaaggctatgcgctggaaaacgccatgaactattcggtc
ggttttcgcgcgcccaatagccgtgagctgatcagcggttttgccgattacgtcctgcaa
cgggagttgggcaatacatactacagcgatccggatatgccgtcccgcaagcatccggcg
gatatcctgccgcaggagatggataaactgcgtaatatgatgctcgatttgatcaatcaa
cccgcgcatttccaacagtggcttggcgagtttctctctcagtcacgccacgaactggat
attgcgccgccggagccgccgtatcagcctgatgaaatttacgatgccttaaagcaaggc
gaggtattagtacgtctcggcgggcttcgcgtattgcgtatcggcgatgaggtctatgcg
aatggcgaaaaaatagactctccgcatcgccccgctctggaggcgctcgccagtcatatt
gcactgaccgctgaaaacttcggcgatgcgctggaagacccgtccttcctcgcgatgctg
gcggcgctggtgaatagcgggtactggttcttcgaaggataa

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