Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078: SPUL_1268
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Entry
SPUL_1268 CDS
T01740
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sel
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078
Pathway
sel03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SPUL_1268 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sel03400
]
SPUL_1268 (nth)
Enzymes [BR:
sel01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SPUL_1268 (nth)
DNA repair and recombination proteins [BR:
sel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SPUL_1268 (nth)
Prokaryotic type
SPUL_1268 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
P_gingi_FimA
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AET53646
LinkDB
All DBs
Position
complement(1293930..1294565)
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AA seq
211 aa
AA seq
DB search
MNKAKRLEILTRLRDNNPHPTTELNFTSPFELLIAVLLSAQATDVSVNKATAKLYPVANT
PAAMLELGVEGVKSYIKTIGLFNSKAENVIKTCRILLDKHNGEVPEDRAALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPNEFKVDCHHWLI
LHGRYTCIARKPRCGSCLIEDLCEYKEKVDI
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagcaaaaaggctggaaattctgacgcgcctgcgcgacaacaatccgcacccc
acaacggaactcaatttcacgtcgccgtttgagttgctgattgccgtgttgctttccgcg
caggcaaccgacgtcagcgtgaacaaggctaccgccaaactttacccggtcgccaatacg
ccagccgcgatgctggaactgggcgtagaaggcgtgaaatcctatatcaaaaccatcggt
ttatttaacagtaaagcggaaaacgtgattaagacctgccgtattttactggacaagcat
aatggcgaagtgccggaggatcgggcggcgctggaagcgcttcccggcgtggggcgaaaa
accgctaacgtagtactaaataccgccttcggctggccgaccatcgccgttgatacgcat
atatttcgtgtatgcaaccgaacacagttcgcgccgggtaaaaatgtcgaacaggtagaa
gagaagttgctgaaagtggtgccgaatgagttcaaagtggactgccatcactggttaatt
ttgcatggccgctatacctgtatcgcccgaaaaccccgctgcggctcctgcctcattgaa
gacctttgcgaatacaaagaaaaagtcgatatttga
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