Selenomonas sp. TAMA-11512: TAMA11512_12250
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Entry
TAMA11512_12250 CDS
T10655
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
selm Selenomonas sp. TAMA-11512
Pathway
selm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
selm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TAMA11512_12250 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
selm03400
]
TAMA11512_12250 (nth)
Enzymes [BR:
selm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
TAMA11512_12250 (nth)
DNA repair and recombination proteins [BR:
selm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TAMA11512_12250 (nth)
Prokaryotic type
TAMA11512_12250 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
DUF763
Motif
Other DBs
NCBI-ProteinID:
BEU87761
LinkDB
All DBs
Position
1291358..1291990
Genome browser
AA seq
210 aa
AA seq
DB search
MRVTKKIKEEQLAILERVYFDAKPELVFNTPFELLIAVILSAQCTDKRVNIVTARLFQKA
STPEAIIELGLSALEEEIHDCGFFHNKAKNIMATCHRLVEEYNGEVPEKFEQLLALPGVG
RKTANVVASVAFGYPAIAVDTHVFRIANRLKLAMGETPEEVELGLMKAIPKEKWSAAHHW
LIWHGRRICKARKPLCDACPLRDVCPSFSG
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgcgagttacaaagaagataaaagaggaacagcttgccatattggagcgagtgtatttt
gatgcaaagccggaacttgtgttcaacacgccttttgagctgctcattgcggttattctg
tcagcgcagtgcacggacaaaagagtcaacattgtgacggcacgcctctttcaaaaggct
tctacaccggaggcgattatcgaacttggactatccgcattagaagaggaaatccacgat
tgcggtttttttcacaataaggcaaagaatatcatggcaacatgtcatcggttagtcgag
gagtataatggcgaggtgccggaaaaatttgaacagctccttgcgcttcccggtgtcgga
cggaaaacggcaaatgttgtagcgagtgtcgcctttggttatcctgcgatagccgtggat
acacatgttttccgcatcgccaaccggttaaaactggctatgggagaaacgccggaagaa
gttgagttgggactgatgaaagccatcccgaaagagaagtggtcggctgcacaccactgg
ctgatttggcacggcagacgtatctgtaaggcaagaaagccgctttgcgatgcgtgtccc
ctgcgagatgtgtgtccaagtttcagcggatag
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