Selenomonas sp. TAMA-11512: TAMA11512_18540
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Entry
TAMA11512_18540 CDS
T10655
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
selm Selenomonas sp. TAMA-11512
Pathway
selm01501
beta-Lactam resistance
selm01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
selm00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
TAMA11512_18540
01503 Cationic antimicrobial peptide (CAMP) resistance
TAMA11512_18540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
selm02000
]
TAMA11512_18540
01504 Antimicrobial resistance genes [BR:
selm01504
]
TAMA11512_18540
Transporters [BR:
selm02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
TAMA11512_18540
Antimicrobial resistance genes [BR:
selm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
TAMA11512_18540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
ABC_membrane
2TM_P5A-ATPase
Motif
Other DBs
NCBI-ProteinID:
BEU88390
LinkDB
All DBs
Position
complement(1938258..1941455)
Genome browser
AA seq
1065 aa
AA seq
DB search
MARFFIHRPIFAIVIALVITIVGIISALQLAVAQYPQISPPSVTVGTMYTGANASVVNDT
VASIIEEQINGTEGMDYMSSNSDDTGRYSLTVTFDTDTDADMDSVKVQNNAATATASLPG
DVQQVGITTRKASNDMSLIVQMSSPDGSYDSVWMKNYISVYMMDKIKRVPGVGDVNVFGS
DYSMRIWLNPDKLAELNLTIANVTAALNEQNVQAPAGTIGQMPAPRDQEKQYTGKVQGRL
TTPEEFGNVILRAEPNGAFIRLKDVARIETGAKTNNIEVRQNGGATSVAFGVMMTNDANA
METVSGVKKIVEETQQELPPGLELTEIVDSTKFIRNSIEEVLHTFFEALVLVVLVIFIFL
QSWRATLIPLIAVPVSLIGTFGSFVLLDFSINTLTLFAMVLAIGLVVDDAIVVIENVEHH
MTQEGLSPIDATERAMDEVQGPVVAIAVVLASVFVPMAFLGGMTGILYKQFSLTIAVSMG
ISAFVALTLTPALCAMMLKPHDPEAKKSVLDRFFDAFNQWFERLTNRYTGIVAWSLKQAK
LAIVFMAVIIAGIYVLFNALPSTLVPDEDQGYYVVSTTLPEGTSLNRTMETAQPIADMLG
TLPGVDRVMAITGFDILSFGSKPNASTMFVALKPWEERTTMETNINTLIGKSIGMANAAR
PEAFTLAFNTPALPGLGMVGGFTMQLQDLQGHTEEGLDQITKQIVAAANARPELQGVRTT
YSIASPTVEFDVDREKVKNLGVQLSDVFTAMQVNYGGYQVNDFNEFGRSYKVMLQADTDY
RNASETTRFFFVKNNAGTMVPLNTLLTPHNSTGPTIISRFNNARAVQIQGNAAEGYSSGQ
AIAAIQEVVHEVAPTGFGIEWSGTAREEVKASGSTARVIALALVFVFLALAALYESWSVP
FAVLMTVPTGIFGALFSEWLIGLLYGVLGLENGGLQNSLYMQIGIIMIMGLAAKNAILIV
EFAKVRVDRGMDPFKAAVEAAGLRLRPILMTSFAFILGCVPLAIASGAGSAARNGMGVAV
VGGMTFATMVGIFLIPVFYIIVEKVAHFLGGGTKRGKEKTSTDYM
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
ttggcaagattttttatacaccgaccgattttcgccatcgtcatcgcgctggtgatcacg
atcgtcggcatcatctccgcgctgcagctcgctgtggcgcagtatccgcagatttcgcct
ccatccgttaccgtcggcacgatgtatacgggggcgaatgcctccgttgtcaacgatacg
gttgcttccatcatcgaagagcagatcaacggtacggaaggcatggactatatgtcgtcc
aattcggatgatacgggccgttattctctgacggttacgtttgacaccgataccgatgcc
gacatggattccgtcaaggtgcagaacaacgccgctacggcgacggcatcccttcccggt
gatgtccagcaggtgggcatcacgacccgcaaggcatcgaatgatatgtctctcatcgtt
cagatgtcatcgccggacggctcctatgattccgtttggatgaagaattatatttccgtc
tacatgatggacaagatcaagcgcgtcccgggcgtcggcgatgtcaatgtcttcggctcc
gactactccatgcgcatctggctcaatccggataagctcgccgagctgaacctcaccatc
gccaatgtgacggctgcgctgaatgagcagaacgtgcaggcgccggcgggcacgatcggc
cagatgccggccccgcgcgatcaggagaagcagtatacgggcaaggtgcagggacgtctg
acgacaccggaggaattcggcaatgtcatcctgcgggcagagccgaacggtgcgttcatc
cgtcttaaggatgtcgcgcgcatcgaaacgggcgcaaagacgaacaacattgaagtccgg
cagaatggcggcgctacgtccgtcgctttcggcgtcatgatgacgaatgacgcaaatgcg
atggaaacggtctccggagtcaagaaaatcgtcgaggagacacagcaggagctgcctccg
gggcttgagctcacagagattgtcgactcgacaaagtttatccgaaactccatcgaagag
gtgctgcacaccttcttcgaggcgcttgttctcgtcgtgcttgtcatcttcatcttcctg
cagagctggagagcgacgctcattccgctcatcgccgtgccggtctcgctgatcggtacg
ttcggctctttcgtcttgctggacttctccatcaatacgctgaccctgtttgcgatggtc
ttggccatcggtcttgtcgtcgatgatgccattgtcgtcatcgaaaatgtcgagcatcac
atgacgcaggaggggctttctccgatcgacgctaccgagcgtgccatggatgaggtgcag
gggccggtcgtcgcgattgccgtcgtgctcgcctcggtcttcgtcccgatggcgttcctc
ggcggcatgacgggtattctctacaagcagttctcgctgaccatcgccgtctcgatgggc
atttcggcgttcgtcgcgcttacgctcacaccggcgctctgtgcgatgatgctgaagccg
catgatccggaggcgaagaagagcgtgcttgatcggttctttgatgcgttcaaccagtgg
tttgagcgccttacgaaccgatatacgggaatcgtcgcgtggtccttaaagcaggcgaag
ctggcgattgtcttcatggctgttattatcgccggcatctatgtcctcttcaatgccctt
ccctcgacccttgtccccgatgaggatcagggctattacgtcgtttcaacgacactgccg
gaaggtacatcgctcaatcgtacaatggagacggcacagccgattgcggacatgctcggt
acacttcccggcgtggatcgcgtcatggcgattacgggctttgacattctctcattcggc
agcaagccgaacgcgtcgacgatgttcgttgcgctgaagccgtgggaagagcgcacgacc
atggaaaccaatatcaatacgctgatcggcaagtccatcggcatggcgaacgcggcgcgg
ccggaggcgtttacgctcgcgttcaatacgccggcgcttccgggtctcggtatggtcggc
ggctttacaatgcagctgcaggatctgcaggggcatacggaggaggggctcgatcagatt
acaaagcagattgttgcggcggcgaatgcgcgtccggagctgcagggtgtccgtacgacg
tattccatcgcctcgccgaccgtcgagtttgatgttgaccgcgaaaaggtcaagaatctc
ggcgtgcagctttccgatgtcttcacagcgatgcaggtcaactacggcggctatcaggtg
aacgacttcaatgagttcggccgcagctacaaggtcatgctgcaggcggatacggactac
aggaacgcctccgagacgacgcgcttcttctttgtaaagaacaatgccggcacgatggtg
ccgctcaatacgcttctcaccccgcacaactcgaccggcccgacgatcatctcgcgcttt
aacaacgcgcgtgccgtgcagattcagggaaatgccgcggaaggatacagctccgggcag
gcgatcgccgcgattcaggaagtcgtacacgaggtcgctccgaccggattcggcattgag
tggtcgggcacggcacgcgaggaagtgaaggcgtcgggctcgacagccagggtcattgcc
cttgcactcgtcttcgtattccttgctctcgcggcgctctatgagagctggtcggtgccg
ttcgccgtcctcatgaccgtgccgacaggcatcttcggagctttgttctccgagtggctg
atcggactcctatacggcgtgctgggactggaaaacggcggcctgcaaaattccctttac
atgcagatcggcatcatcatgattatgggacttgccgcgaagaatgccatcctcatcgtc
gagttcgccaaggtgcgcgtcgaccgcggaatggatcccttcaaggcggccgtcgaggcc
gccgggctgcgacttcgtccgatcctaatgacgagctttgcctttattctcggctgcgtg
cctctggccatcgcttcgggggcgggatcggcggctcgtaacggcatgggtgttgccgtc
gtcggcggcatgacgttcgcgacgatggtcggtatcttcctcatcccggtcttctacatc
attgtcgagaaggtggctcacttcctcggcggcggtacgaagcgcggaaaagagaagact
tccacggattatatgtaa
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