Selenomonas sp. TAMA-11512: TAMA11512_18550
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Entry
TAMA11512_18550 CDS
T10655
Symbol
adeD
Name
(GenBank) multidrug efflux RND transporter periplasmic adaptor subunit AdeD
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
selm Selenomonas sp. TAMA-11512
Pathway
selm01501
beta-Lactam resistance
selm01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
selm00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
TAMA11512_18550 (adeD)
01503 Cationic antimicrobial peptide (CAMP) resistance
TAMA11512_18550 (adeD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
selm03036
]
TAMA11512_18550 (adeD)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
selm02000
]
TAMA11512_18550 (adeD)
01504 Antimicrobial resistance genes [BR:
selm01504
]
TAMA11512_18550 (adeD)
Chromosome and associated proteins [BR:
selm03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
TAMA11512_18550 (adeD)
Transporters [BR:
selm02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
TAMA11512_18550 (adeD)
Antimicrobial resistance genes [BR:
selm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
TAMA11512_18550 (adeD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
RND-MFP_C
Beta-barrel_RND
HH_MFP_RND
YknX_C
Beta-barrel_RND_2
BSH_CzcB
BSH_CusB
CzcB_C
HH_EMRA
HH_YBHG
Nmad5
BSH_YhbJ
N_NLPC_P60
She9_MDM33
Vault
Motif
Other DBs
NCBI-ProteinID:
BEU88391
LinkDB
All DBs
Position
complement(1941468..1942664)
Genome browser
AA seq
398 aa
AA seq
DB search
MFSFKMKRRELAAAAVLAISVLLAGCGGNEAQPQGAGKQVKAMQVLRQDTPLSSEYAGQV
RSMDQVNVQARVSGNVIEKYFHGGDYVSAGQPLYRIDSRQYEAAVLQAQANLAQVRATLN
NARVDLARYEELLKSDSIAEQTVATQRANVSAYEAAVDANEALLLRARQDLDDTIVYAPM
SGKLGVDDVAVGTYATAGNTTLVTLGSDSPVYIQFAISETEYLKFMGMRNYGDSNDPSNL
SVGIKLSDGTEYPLQGRLVAADRSLAENTGTLTVRAVVDNPNGALLSGMFARVKLSGEII
PNAMLVPQRAVQQLLGKSFVIVVGPDNKSVTKIVTVGTQIGSYVLIESGLEPDDVVVVEG
LTNLQEGMPLAVTMVTAQDMGFSLESSSEQVTASGSNK
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
ttgttttcgtttaagatgaagagacgtgaactggctgcggctgcggtcttggctatatcg
gtgcttttggcgggctgcgggggaaatgaggcgcagccgcagggtgcaggcaagcaggtc
aaagccatgcaggttctccgtcaggatacgcccctttccagtgaatacgccggtcaggtg
cgcagcatggatcaggtcaatgtgcaggcgcgcgtctccggcaatgtgattgagaagtat
ttccatggcggcgactatgtgtccgccgggcagccgctctaccgcattgattcccgtcag
tacgaagccgctgtcctacaggcgcaggcgaacctcgcacaggtgcgggcgacattgaat
aacgcccgcgttgatctcgcacgctatgaagagctcctgaagtccgactcgattgccgag
cagaccgtagcgacgcagcgcgcaaacgtcagcgcgtatgaggctgccgtggatgcgaac
gaggcactgctgctccgtgcgcgtcaggatctcgacgatacgattgtctacgcaccgatg
agcggtaagctcggcgtcgatgatgtcgccgtcggcacatacgcgacggcgggcaatacg
acgctcgtcacgctcggctccgacagccccgtctacatccagtttgccatctccgagacg
gaatatttgaagtttatggggatgcgcaactatggcgattccaatgatccgtccaatctc
tcggtgggcatcaagctttccgacggcaccgagtatccgctgcagggacgtcttgtcgcg
gcggaccgctcgcttgccgaaaatacgggtacgctcaccgttcgtgccgtcgtggataat
ccgaacggcgctcttctttcgggcatgttcgcgcgtgtcaagctctccggagagatcatt
ccgaatgcgatgctcgttccgcagcgcgcggtgcagcagctcctgggcaaatcctttgtc
atcgtcgtcggcccggacaacaagtcggtcacgaagatcgttacggtcggtacgcagatc
ggcagctatgtcctcatcgaaagcggccttgagccggatgacgtcgtcgtcgtggaaggt
ctgacaaatctgcaggaaggcatgcctcttgccgtcacgatggtgacggcgcaggatatg
ggattctctcttgaatcttcgagcgagcaggtaaccgcgtccggctcgaacaagtaa
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