Saccharopolyspora erythraea: SACE_6177
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Entry
SACE_6177 CDS
T00492
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
sen
Saccharopolyspora erythraea
Pathway
sen03030
DNA replication
sen03410
Base excision repair
sen03420
Nucleotide excision repair
sen03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SACE_6177
03410 Base excision repair
SACE_6177
03420 Nucleotide excision repair
SACE_6177
03430 Mismatch repair
SACE_6177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sen03032
]
SACE_6177
03400 DNA repair and recombination proteins [BR:
sen03400
]
SACE_6177
Enzymes [BR:
sen01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
SACE_6177
DNA replication proteins [BR:
sen03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SACE_6177
DNA repair and recombination proteins [BR:
sen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
SACE_6177
NER (nucleotide excision repair)
GGR (global genome repair) factors
SACE_6177
MMR (mismatch excision repair)
DNA ligase
SACE_6177
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SACE_6177
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
HHH_5
HHH
BRCT_2
Microp_archaea
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
CAM05350
Kitasato:
SACE_6177
Cambridge:
SACE_6177
UniProt:
A4FMS5
LinkDB
All DBs
Position
complement(6923791..6925974)
Genome browser
AA seq
727 aa
AA seq
DB search
MTSNDPADPADRAEFDDAAVAGMTSEAEAGATAEGVEDVPAGVRERYADLVEQVRAHQFR
YYVLDSPTISDGEFDELFTELQTLESDHPALRDPDSPTQVVGGTFSTDFTAVDHLERMLS
LDNAFDPDELRAWVERVEREVGSSAHYLCELKIDGLAINLLYRDGKLERALTRGDGRTGE
DVTLNVRTMDDVPDQLTGTDEYPVPALVEIRGEVFFRVDEFAQLNASLVEAGKPPFANPR
NSAAGSLRQKDPRVTKSRPLRMICHGLGKREGFEPKQQSESYAALRAWGLRVSPHTKVLS
TVDEVLEHIDYWGKHRNSAEHEIDGVVVKVDEVSLQRRLGATSRAPRWSIAYKYPPEQAT
TRLLDIQVAVGRTGRVTPYAVMEPVKVAGSTVARATLHNADQVRHKGVLIGDRVVIRKAG
DVIPEVLGPVVDVRDGSEREFVMPTECPDCGTALAHQKEGDVDLRCPNSHNCIGQRRERL
FQLAGRKAFDIEVLGYEGVSALLSAGVVFDEGDLFDLNEEALLKTTLFRTDDGSLSVNGG
KLLANLESAKQQPLWRVLVALSIRHVGPIAARVLAREFGSLDRIQEASEEELAAGEGVGP
TIATAVREWFDVDWHREIVRKWSEAGVRMADERDESIERHLTGLSIVVTGSLEGFSRDEA
KELIMARGGRAAGSVSKKTAFVVVGESPGSKYDKAVQMKVPVLDEDGFRVLLEQGPEAAA
EAALPAE
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
gtgaccagcaacgacccagccgacccagccgaccgcgccgagttcgacgacgcggcggtc
gccggaatgaccagcgaggccgaggccggtgcgacggccgagggcgtcgaggacgtgccc
gccggagtgcgggagcgctacgccgatctcgtcgagcaggtgcgcgcgcaccagttccgg
tactacgtgctggactcgccgacgatctccgacggcgagttcgacgagctgttcaccgag
ctccagacgctggagtccgaccaccccgcgctgcgcgacccggactcgccgacgcaggtg
gtgggcggcaccttctccaccgacttcaccgcggtggaccacctggagcggatgctcagc
ctcgacaacgccttcgaccccgacgagctgcgcgcctgggtggagcgggtcgagcgcgag
gtcggctcctccgcgcactacctgtgcgagctgaagatcgacggccttgccatcaacctg
ctctaccgcgacggcaagctcgaacgcgcgctgaccaggggcgacggacgcaccggcgag
gacgtcacgctcaacgtccgcaccatggacgacgtgcccgaccagctgaccggcaccgac
gagtacccggtgcccgcgctggtggagatccgcggcgaggtgttcttccgggtcgacgag
ttcgcccagctcaacgcgtcgctggtggaggcgggcaagccgccgttcgccaacccgcgc
aactcggccgccggctcgctgcggcagaaggacccgcgggtgaccaagagccgcccgctg
cggatgatctgccacggcctcggcaagcgcgagggcttcgagccgaagcagcagtcggag
tcctacgccgcgctcagggcgtggggcctgcgggtctccccgcacaccaaggtgctgtcg
acggtggacgaggtgctggagcacatcgactactggggcaagcaccgcaactccgccgag
cacgagatcgacggcgtcgtggtcaaggtcgacgaggtgtcgttgcagcgcaggctcggc
gccacctcgcgcgccccgcgctggtcgatcgcctacaagtacccgccggagcaggccacc
acccggctgctggacatccaggtcgccgtgggccgcaccggccgggtcaccccgtacgcg
gtgatggagccggtcaaggtcgccggctcgacggtcgccagggcgacgctgcacaacgcc
gaccaggtccgccacaagggcgtgctgatcggcgaccgggtggtcatccgcaaggccggt
gacgtgatccccgaggtcctgggcccggtcgtcgacgtccgcgacggcagcgagcgcgag
ttcgtcatgccgaccgagtgccccgactgcggcacggcgctggcccaccagaaggagggc
gacgtcgacctgcgctgcccgaactcgcacaactgcatcgggcagcgccgcgagcgcctg
ttccagctcgccgggcgcaaggcgttcgacatcgaggtgctgggctacgagggcgtgtcg
gcgctgctgtcggcgggcgtggtcttcgacgagggcgacctcttcgacctcaacgaggag
gcgctgctcaagaccacgctgttccgcaccgacgacggcagcctgtcggtcaacggcggc
aagctgctggccaacctggagtcggcgaagcagcagccgctgtggcgggtgctggtggcg
ctgtccatccggcacgtgggcccgatcgcggcgcgggtgctggcccgcgagttcggctcg
ctcgaccgcatccaggaggcgtcggaggaggagctggcggcgggcgagggcgtcggcccg
acgatcgccaccgccgtgcgcgagtggttcgacgtcgactggcaccgcgagatcgtgcgc
aagtggagcgaggccggcgtccggatggccgacgagcgcgacgagtcgatcgagcgccac
ctgaccggcctgtcgatcgtggtcaccgggtcgctggagggcttctcccgcgacgaggcc
aaggagctgatcatggcgcgcggtggccgggccgccggctcggtgtcgaagaagaccgcg
ttcgtcgtcgtcggcgagtcgcccggctccaagtacgacaaggcggtgcagatgaaggtg
ccggtcctggacgaggacggcttccgcgtcctgctggagcagggcccggaagcggcggcc
gaagcggcgctgcccgccgagtga
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