Salmonella enterica subsp. enterica serovar Typhimurium DT104: DT104_08961
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Entry
DT104_08961 CDS
T02874
Symbol
ybjF
Name
(GenBank) hypothetical RNA methyltransferase
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
send
Salmonella enterica subsp. enterica serovar Typhimurium DT104
Brite
KEGG Orthology (KO) [BR:
send00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
send03009
]
DT104_08961 (ybjF)
Enzymes [BR:
send01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
DT104_08961 (ybjF)
Ribosome biogenesis [BR:
send03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DT104_08961 (ybjF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Cons_hypoth95
Methyltransf_15
Methyltransf_12
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
CCW73608
LinkDB
All DBs
Position
976810..977940
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AA seq
376 aa
AA seq
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MQCALYDAGRCRSCQWITQSVNEQLSAKTADLHRLLAGLPVEQWCAPIGGPEQHFRNKAK
MVVSGSVEKPLFGMLHRDGTPVDLCGCPLYPASFDPVFSALKPFIARAGLTPYNVARKRG
ELKYLLLTESQFDGGMMLRFVLRSETKLTQLRAALPWLRAQLPQLRVITANIQPVHMAIM
EGETEIYLTDQQALAERFNDVPLWIRPQSFFQTNPTVASRLYATARDWVGQLPVRHMWDL
FCGVGGFGLHCATPQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFATAQGET
PDLVLVNPPRRGIGKPLCDYLAQMAPRFIIYSSCNAQTMAQDIRHLPNYRIQRVQLFDMF
PHTAHYEVLALLRRSI
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgcgcactctatgacgcgggtcgctgccgttcctgtcaatggattacgcagtcg
gttaacgaacaactttccgcaaaaacagccgatttacatcgtttgctcgccgggctgcct
gttgaacagtggtgcgcgccgattggcggcccggaacagcatttccgcaacaaagcgaaa
atggtcgtgagcggtagtgtagaaaaaccgctcttcgggatgctgcatcgcgacggtacg
ccggtcgatctttgcggctgcccgctgtatcccgcctcctttgaccccgtattcagcgcg
ctaaaaccttttattgcccgggccggactcacgccttataacgtggcgcgaaaacgtggc
gaactgaaatacctgttgctgacggaaagtcagttcgatggcggcatgatgctacgcttc
gtgttgcgttcagaaaccaaacttacgcaactgcgcgcggcgttaccgtggctgcgtgcg
caactgccgcagctcagagtgatcaccgcaaatatccagccggtacatatggcgattatg
gaaggggagacggaaatctacctgacggatcagcaggcgctggcggaacgttttaacgat
gtgccgctgtggattcgtccgcaaagtttctttcagaccaaccctacggtcgccagccga
ttatatgcaacggcgcgcgattgggtagggcaactgccggtacgccatatgtgggatctt
ttttgcggagtgggcggattcggcctgcactgcgcgacgccgcagatgcaattaaccggt
attgagatcgcgccggaggcgattgcctgcgcgaagcaatccgctgccgagctgggattg
acccgccttcatttccaggcgttggattccacccaattcgccaccgcacaaggcgaaacg
cccgatctggtgttggtaaatcctccccgccgcggcattggcaagccgttgtgcgattac
cttgcacaaatggcgccgcgttttatcatttattcgagctgtaacgcgcagacgatggcg
caggatattcgtcatctgccgaactaccgtattcaacgtgttcagcttttcgatatgttc
ccgcataccgcgcattatgaggttttagcgttactgcgcaggtcaatataa
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