Spirosoma endbachense: GJR95_26560
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Entry
GJR95_26560 CDS
T09865
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
senf
Spirosoma endbachense
Pathway
senf00300
Lysine biosynthesis
senf00550
Peptidoglycan biosynthesis
senf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
senf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GJR95_26560
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GJR95_26560
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
senf01011
]
GJR95_26560
Enzymes [BR:
senf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
GJR95_26560
Peptidoglycan biosynthesis and degradation proteins [BR:
senf01011
]
Precursor biosynthesis
Amino acid ligase
GJR95_26560
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
HTH_micro
DUF3440
Motif
Other DBs
NCBI-ProteinID:
QHV98343
UniProt:
A0A6P1VYX1
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All DBs
Position
complement(6524047..6525525)
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AA seq
492 aa
AA seq
DB search
MQLKDLFYKISLLATSGSMSTDITNLTMDSRKVGPGSLFVAVRGTVTDGHNFIATAVKQG
ASAVLCEEFPVETDPSVAYVRVLDSARTMGLVAANFYGQPSQKLKLIGVTGTNGKTSVAT
LLFRLFRGLGYRCGLLSTVQNQIDDQVIPATHTTPDVITTNQLLTQMLTYGCTHVFMEVS
SHAVVQERIAGLTFAGGIFTNITHDHLDFHGTFDNYIRAKKGFFDQLPASAFALTNVDDK
RGLVMLQNTAARKETYSLQTLATFKGKIIADSLFGLNMLVDDKEVWFKLIGRFNGYNLLS
VYGTAVLLGEDPAEVLTLLSGITPPPGRFEQVVSDDKIVGIVDYAHTPDALQNVLETINE
ILQDDEQGRQPQIITVVGCGGNRDAAKRPIMADIACRFSNRVILTSDNPRNEDPMAILEQ
MQAGVSPVDYKKTVTIEDRRDAIKRAVSIARPHDIILVAGKGHETYQEIKGIKYDFDDHA
VLQEAFSERGNQ
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgaaagatcttttttataaaatttcgctgctggctacatctggcagtatgagc
accgacatcacgaatcttaccatggactcccgtaaggtaggtcccggtagtttgtttgtg
gccgttcgtggcacagttaccgatggacataatttcattgcaactgcggttaaacagggc
gcttcggccgtgttgtgcgaagaatttcctgtcgagaccgacccttcagtggcttatgtg
cgcgtgctggattctgcccgaacaatggggcttgtagccgctaatttttatggccaaccc
tcacaaaagctgaaacttattggggtaacgggtacaaatggtaaaacgtccgttgctaca
ctgctctttcggttatttagggggttaggataccgctgcggccttctgtcaaccgttcag
aatcagattgatgatcaggttattccggctacgcataccactcccgatgtaatcactacc
aatcagctgttaacgcagatgttgacgtatggctgcacccatgtatttatggaagtgagc
tcacatgcggtggtgcaggagcgtatcgcggggttaactttcgccggagggatttttaca
aatattacccacgatcatctggattttcatggaacgttcgacaactatatacgggcaaaa
aagggttttttcgaccagttaccagcttctgcttttgcactaaccaacgtagatgacaaa
cgtgggctggtgatgctacaaaatacggcagccagaaaggaaacctattcgctgcaaaca
ttagcaacctttaaagggaaaattattgccgacagcctgtttggccttaatatgctggtt
gacgacaaagaagtctggtttaaacttatcggccggtttaacggctacaatctgctcagt
gtttatggcacggccgtgctgctgggcgaagatcctgccgaggtattgacattattgtct
ggaattacgccaccaccaggtcgatttgagcaggttgtttccgatgataaaattgttggt
attgtcgattatgcccatacacctgatgcgttacaaaacgtactggaaacaattaacgaa
atactccaagatgacgagcagggacgccagccgcagattataacggttgtgggctgtggc
ggcaatcgtgatgctgcaaagcgacccattatggccgacattgcctgccggttcagcaat
cgcgtcattctgacgtccgacaatccgcggaacgaagatccgatggcaattctggaacag
atgcaggctggtgtttcgcccgttgattacaaaaaaacggtaacgatagaagaccgccgt
gatgccataaaacgagccgtttctatagccaggccgcacgatattattcttgtagcgggc
aaagggcatgaaacctatcaggaaattaagggaattaaatacgattttgatgaccatgcc
gtgttacaggaagctttctcggaacgcggaaatcagtaa
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