Spirosoma endbachense: GJR95_28150
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Entry
GJR95_28150 CDS
T09865
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
senf
Spirosoma endbachense
Pathway
senf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
senf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GJR95_28150 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
senf03400
]
GJR95_28150 (nth)
Enzymes [BR:
senf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GJR95_28150 (nth)
DNA repair and recombination proteins [BR:
senf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GJR95_28150 (nth)
Prokaryotic type
GJR95_28150 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
HHH_2
HHH_3
HHH_8
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
QHV98641
UniProt:
A0A6P1VZN2
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All DBs
Position
6930148..6930795
Genome browser
AA seq
215 aa
AA seq
DB search
MQKKERFQRFLDYFTQHYPEPKTELNFGNPFELLVAVILSAQCTDKRINQITPALFARFS
EPESLAAASVDEVFTYIRSVSYPNNKAKHLVGMAKVLMERFGGEIPATVEELQTLPGVGR
KTAHVILSVVYNEPTMAVDTHVFRVSHRLGLAPLTATTPLAVEKALMAHIPKQYVPKAHH
WLILHGRYVCLARTPKCEICALKEFCKYYEKRFGL
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaaaagaacgcttccagcgatttctcgattattttacccagcattatccggag
cctaaaacagaattaaatttcggcaacccgtttgagttgctggttgctgttattttatcg
gctcagtgcacggataagcgaattaaccagattactccagctctttttgctcgcttttcg
gagccagaatcgctggcggctgcctcggttgatgaagtatttacctacatccgcagcgtg
tcgtatcccaacaacaaggcaaagcacctggtcgggatggcaaaagtgttaatggaacgc
tttgggggagaaattccggcaaccgttgaggagttgcagacattgccgggcgttggccga
aaaacggcccatgtcattttatcagtcgtctataatgaaccgacaatggccgttgacacg
catgtttttcgtgtctcacatcggctggggcttgctccactaactgcaacaacgccactt
gccgttgaaaaagcattgatggcccacattccgaaacaatacgtccctaaagctcatcac
tggcttattttacatggacgatatgtatgcctcgcccgtacacctaagtgcgaaatatgc
gccctgaaggaattttgcaagtattatgagaagcgttttggattatga
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