Spirosoma endbachense: GJR95_40590
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Entry
GJR95_40590 CDS
T09865
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
senf
Spirosoma endbachense
Pathway
senf01501
beta-Lactam resistance
senf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
senf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GJR95_40590
01503 Cationic antimicrobial peptide (CAMP) resistance
GJR95_40590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
senf03036
]
GJR95_40590
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
senf02000
]
GJR95_40590
01504 Antimicrobial resistance genes [BR:
senf01504
]
GJR95_40590
Chromosome and associated proteins [BR:
senf03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
GJR95_40590
Transporters [BR:
senf02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GJR95_40590
Antimicrobial resistance genes [BR:
senf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GJR95_40590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
RND-MFP_C
Beta-barrel_RND
YknX_C
HH_MFP_RND
BSH_CzcB
Beta-barrel_RND_2
HH_EMRA
BSH_CusB
HH_AAEA_pHBA
CzcB_C
HH_YBHG
BSH_YknX
She9_MDM33
SurA_N_2
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
QHW00953
UniProt:
A0A6P1W987
LinkDB
All DBs
Position
10109681..10110847
Genome browser
AA seq
388 aa
AA seq
DB search
MIKRFLIPVIAVFLTACGGNKNNQQQAPPPPTAVTAMEVSKGSATYYDEFPATVTALVLV
DIQPQVAGNITGIFFQDGQPVRKGQKLYTIDPQQYRAGYDQAVANLNVQKANMNRAQKDA
DRYNTLAQQDAVAKQLVDNANATLEAAKMQVEAAQASIQQVATNLKYTTIFAPLDGTIGI
SQVRLGAAVAPGSTPLNTISSDNPIAADVQVDESEISRFLQLQNQKSVARDSTFILMLPD
GSRYPYPGSVRIVDRAIDPQTGTIRIRIAFPNPKKQLKAGLSANVRVKNSTGKPQLLIPY
QAVTEQMSEYFVWVVGDSSKVTQKKVTLGPRINDKVVVRNGLNEGETIVTEGTQKVREGA
VVKITSPGQTTAGPGDAKPESSSKQAAK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacgctttcttattccagttatagctgtatttctcactgcttgtgggggcaat
aaaaacaatcagcagcaagctccaccaccaccaacggccgtcacggccatggaagtttcg
aaggggagcgcgacttattatgatgaattcccggctacggttacggctttggttcttgtt
gacatacagcctcaggtagctggtaacatcacgggtattttctttcaggacgggcagcct
gtccggaaagggcagaagttatacacgatcgatccgcaacaataccgggctggttatgat
caggcggtggcgaacctgaacgtgcagaaagcgaacatgaatcgtgctcagaaagacgct
gaccggtataataccctggctcagcaggacgctgttgccaagcaactggtcgataatgca
aacgcaaccctggaagcggctaaaatgcaggttgaggctgcccaggcgagtattcagcaa
gtggccacgaacctgaaatacacgacgattttcgcgccacttgacggcacgatcggtatc
tctcaggtacggttaggagcggccgttgcccctggctcaacacctttgaataccatttcg
tcggataatccgattgcggctgatgtgcaggttgatgagtcagagatttcgcgctttctg
caactccagaatcagaaatcggtagcccgcgactctacctttattctgatgcttcccgat
ggtagccgttacccatatcctggttcggttcgtattgtcgaccgcgctatcgatccgcaa
acgggcaccattcgcattcggattgccttcccgaatcccaaaaaacagcttaaagctggt
ttgtctgccaatgtgcgggttaaaaacagcacgggtaagccgcaactgctgattccttat
caggccgtgaccgagcaaatgagcgaatatttcgtctgggtagttggtgatagcagcaaa
gtaacgcagaaaaaggtaacccttgggccacgtatcaatgataaagttgtggttcgaaat
gggttgaacgaaggcgaaacaattgtgacggaaggaacgcagaaggttcgcgaaggagca
gttgtgaaaataacgtctccggggcagacaacggctggaccgggtgatgcaaagcctgaa
tcgagtagtaagcaggctgcaaaataa
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