Sodalis endosymbiont of Henestaris halophilus: HBA_0539
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Entry
HBA_0539 CDS
T05311
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
seny
Sodalis endosymbiont of Henestaris halophilus
Pathway
seny03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
seny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HBA_0539 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seny03400
]
HBA_0539 (nth)
Enzymes [BR:
seny01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HBA_0539 (nth)
DNA repair and recombination proteins [BR:
seny03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HBA_0539 (nth)
Prokaryotic type
HBA_0539 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
SNC58785
LinkDB
All DBs
Position
I:complement(912028..912666)
Genome browser
AA seq
212 aa
AA seq
DB search
MNKIKRYNILCRLRDNNAHPTTELVYYSHFELLIAVLLSAQATDVSVNKATSQLFPIANT
PQTMIALGVEGVKSYIKAIGLFNRKAENIIKTCQLLLERYQGEVPEDRAALESLPGVGRK
TSNVVLNIAFGWPTIAVDTHVFRVANRTRFAVGKDAKAIEQKLLANVPKSFQIDCHNLFI
LHGRYTCIAHKPRCSYCLIEDLCEYNQKYYLK
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaataaagcgttataatattctttgtcgcttgcgagacaataatgctcatccc
actaccgaactagtatactattcgcattttgaactattgattgcggtactgctctctgcg
caggctactgatgtcagtgtcaataaagcaactagccagttatttccgatagctaataca
ccgcagaccatgatagcgcttggggttgagggagttaaaagctacataaaagctatagga
ctatttaatcgtaaagcagaaaatatcattaaaacctgtcaactactgttagaacgatac
caaggcgaggtaccggaagaccgcgcggcactagaatcgctgccgggtgtcgggcgcaaa
acctcaaatgtagtgctaaatattgctttcggctggccgacaatcgctgtggatacacat
gtttttcgcgttgctaaccgcacccgatttgcggttggtaaagacgcaaaagcaatcgag
caaaagttgttagctaacgtaccaaaatcatttcagatagattgccacaacttgtttatt
ctacacggccgttatacctgcatagctcacaaacctcgttgcagctattgcctaattgaa
gatctgtgtgagtacaatcagaaatattatcttaaataa
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