Staphylococcus epidermidis PM221: SEB_00404
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Entry
SEB_00404 CDS
T03289
Name
(GenBank) Queuosine Biosynthesis QueE Radical SAM
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
sepp
Staphylococcus epidermidis PM221
Pathway
sepp00790
Folate biosynthesis
sepp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sepp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
SEB_00404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sepp03016
]
SEB_00404
Enzymes [BR:
sepp01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
SEB_00404
Transfer RNA biogenesis [BR:
sepp03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
SEB_00404
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Tricorn_C1
Motif
Other DBs
NCBI-ProteinID:
CDM12968
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All DBs
Position
complement(420363..421076)
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AA seq
237 aa
AA seq
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MAKIPVLEIFGPTIQGEGRVIGRKTMFVRTAGCDYRCSWCDSAFTWDGSAKEDIKLMTAE
EIYDALLEIGGHRFNHVTISGGNPALIKGIQELVDLFEDKHIYTALETQGSRFQSWMTQI
DDLTISPKPPSSGMKTNLEILDSVINQCTFHSLNLKVVIFDDADYDFAKLIHHRYPNIPF
YLQVGNPYLDDNVDQHTDKLLERYEQLVDRVMQSSDMNHVYVLPQLHTLLWSNKKGV
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaatacccgttttagaaatatttggaccaacgattcaaggtgaaggtcgtgta
ataggaagaaaaacaatgtttgtgcgtacagctggttgtgattatcgatgtagctggtgt
gattctgcatttacttgggacggtagtgctaaagaagatatcaaattaatgactgctgaa
gaaatttatgatgcgttacttgaaataggtggtcatcgatttaatcacgtaactatatcc
ggaggtaaccctgcgttaatcaaaggtatacaggaattagtagatttatttgaagacaaa
catatttatacagctttagaaacacaaggtagtcgtttccaatcatggatgacacaaatt
gacgatttaacgattagtccaaaaccccctagttcgggaatgaaaactaatctagaaata
ttagattctgttataaatcaatgtacatttcattcacttaatttgaaagtggtgattttt
gacgatgcagactatgattttgcaaaattaattcatcatcgctaccctaacatcccattc
tatctacaagtaggtaatccttatcttgatgataacgttgaccaacatacagataaatta
cttgaaaggtatgagcaattagtggatcgtgtaatgcaaagtagtgatatgaatcatgtc
tatgtactaccgcaattacacacattattatggagtaataaaaaaggtgtctaa
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