Staphylococcus equorum: SE1039_15220
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Entry
SE1039_15220 CDS
T04160
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
seqo
Staphylococcus equorum
Pathway
seqo03030
DNA replication
seqo03430
Mismatch repair
seqo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
seqo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SE1039_15220
03430 Mismatch repair
SE1039_15220
03440 Homologous recombination
SE1039_15220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
seqo03032
]
SE1039_15220
03400 DNA repair and recombination proteins [BR:
seqo03400
]
SE1039_15220
Enzymes [BR:
seqo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SE1039_15220
DNA replication proteins [BR:
seqo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SE1039_15220
DNA repair and recombination proteins [BR:
seqo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SE1039_15220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
ALM57305
LinkDB
All DBs
Position
complement(1577858..1581061)
Genome browser
AA seq
1067 aa
AA seq
DB search
MVTHLNIHTTYDLLHSSLRIKDVVAKAAKEGYTALAITDTNVLYGYPQFYDACIAANIHP
IFGMTIFVTDGLESVETIVLAQNEQGLKDMFKLSSAIKMKEKTETPIEWLKKYLQHIVVI
FKDVSSSNEAIVADFTDDTHIYVNHTSEVTLELPMVWAQSTRYLNQQDADTLTALAAIRD
NAKLDLVSEQPDYDAHLYDYSDLATLHLSKEVLDNTNQLATICQAEMIYHQSLLPKFKTP
DNQQSKDYLWQVLQENLNQLNLNHNQFDTYRERLVHEYQVITRMGFEDYFLIVSDLIHYA
KTHDVLVGPGRGSSAGSLVSYLLNITTIDPIQYNLLFERFLNPERVTMPDIDIDFEDTHR
DKVIQYVQEKYGDNHVAGIVTFGHLLARAVARDVGRIMGFDEVTLNEISKLIPHKLGITL
DQAYEQNDFKQFVHRNHRHERWFEISKKLEGLPRHTSTHAAGIIINDHPLYEYAPLTLGD
TGLLTQWTMTEAERIGLLKIDFLGLRNLSIIHQIVKQVKKDTNTHIDIEQIPFDDSKVFQ
LLSQGDTTGIFQLESDGIRNVLKKLQPEHFEDIVAVTSLYRPGPMEEIPTYITRRHNPSK
VQYLHSDLQPILSNTYGVIIYQEQIMQIASKFANFSYGEADILRRAMSKKNRAVLESERQ
HFVDGALKNGYDESLSKQIFDLILKFADYGFARAHAVSYSKIAYIMSYLKVHYPNYFYAN
ILSNTIGSEKKTAQIIDEAKHQSINILTPNINQSHWFYKATKQGIYLSIGAIKGVGYQSV
KLIVDERITNGHFKDFFDFTRRIPKRIKSRKLLEALILVGAFDTFGKNRATLLQSIDQVL
DSSSDIEQDGFIFDVLTPKATYEDKEELPDKVLSDYEKEYLGFYVSTHPVEKAFEQKQYL
GIYKLTNARDNQPIFVQIDNIKRIRTKNGQNMAFVTLNDGVNSLDGVVFPDTFKKYETDL
KTDETFILKGKFENRNNKKQLIINQIETVEAFEVSTFEQAKQIVIRNLSDETELKQFLTQ
TENSNYIPIKYFQEEQNKFKIIGYITRDNDVLNTFIQRFSPWDIRII
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atggttacgcatttaaatattcatacaacatacgacttattacattctagtttgagaata
aaagatgttgttgctaaggccgctaaagaagggtacaccgcgttagcgattacagacaca
aatgtcttatacggttacccacaattttatgacgcgtgtattgcagcaaatattcatcct
attttcggtatgacgatttttgtgacagatggtttagagtcagtggaaacgatagtgcta
gcgcaaaatgagcaaggactaaaagatatgtttaagctgtcgtctgctataaaaatgaaa
gaaaaaactgaaacacctatagagtggctgaaaaaatatctacagcatattgttgttatt
tttaaagatgtatcatcatcaaatgaagctattgtagctgattttactgatgatacacat
atttatgtaaatcatacgagtgaagtaacattggaattaccaatggtttgggctcaaagt
acacgttatcttaaccaacaagatgctgatacgcttactgcgctcgctgccatcagggat
aacgctaaattagatttagtgagtgaacaacctgattatgatgcacatttatacgattat
agcgatttggctacacttcatttaagtaaggaagtgctagataacacaaatcaacttgca
acaatatgtcaggctgaaatgatatatcatcagtctttattacctaaatttaaaacgccg
gataatcagcaatcaaaagattatttatggcaagtattacaagaaaacttaaatcaactt
aatttaaatcataaccaattcgacacttatagagaaagacttgttcatgagtatcaagtc
attactcgcatggggtttgaagattactttcttatagtaagtgatttaatacattatgcg
aaaacgcatgatgtattagtaggacctggtcgtggttcttcggcagggtcattggtaagt
tatcttttaaatattactacgattgatcctatacaatataatttattgtttgaacgtttt
cttaatccggaacgtgtaacaatgccggatattgatattgattttgaagatacgcataga
gataaagttattcaatatgtccaggaaaaatatggtgataatcacgttgcaggtattgta
acgttcggtcatttgttagctagagcagtagctagagatgttggtagaattatgggattt
gatgaggttactttgaatgaaatttcaaaattaataccacacaagctaggtataacttta
gatcaagcttacgaacaaaatgattttaaacagtttgtacaccgaaaccataggcatgaa
cgatggtttgaaattagtaaaaaattagaggggttacctcgccatacatcaacacatgct
gcaggtataattattaatgatcacccattatacgaatatgcaccattgacgttaggtgat
actggattattaacacaatggacgatgacggaagcagagagaataggcttgttgaagatc
gacttcttagggttacgaaatttatccattattcatcaaattgtgaaacaagttaaaaaa
gacacgaatacacatattgatatagagcaaataccttttgatgatagcaaagtctttcaa
ttattatctcaaggggatactacaggtattttccaacttgaatcagatggtattagaaat
gtattgaaaaaattacaacctgaacattttgaagatattgtagccgtaacgtctttatac
agaccaggtcctatggaggaaatacctacttatattacgagaaggcataatccatctaaa
gtgcaatatttgcatagtgatttacaaccgatattaagtaacacttatggcgttatcatt
tatcaagaacaaatcatgcaaattgccagtaagttcgcaaactttagttatggagaagcg
gatattttaagacgtgcgatgagtaaaaagaaccgtgctgtattagaaagtgaacgtcaa
cattttgtggatggtgctttgaaaaatggctacgatgaaagtttaagtaaacaaatattt
gatttgattctaaaatttgcagactatggctttgcacgtgcccatgctgtaagctattct
aaaatcgcttatattatgagctatttaaaagtacattatcctaattatttttacgctaat
attttgagcaatactatcggaagcgagaagaagacagcgcaaattattgatgaagcaaag
catcaatcaatcaatattttaacgccgaatattaatcaaagtcactggttctataaagca
actaaacagggtatctacttgtcaattggtgcgattaaaggagtaggttatcaaagcgtt
aagttaattgttgatgaacgcataacaaatgggcattttaaagacttttttgattttaca
agacgtattcctaaaaggattaaatctagaaaattacttgaagcgctcatattagtaggc
gctttcgacacctttggcaaaaatcgtgctacactactacagtcaattgatcaagtactt
gatagttcatctgatattgaacaagacggctttatatttgatgtattaacgcctaaagcg
acatatgaagacaaagaggaattgccggataaagtattgagtgattatgaaaaagaatat
ttaggcttttatgtttcaacacaccctgtcgaaaaagcttttgaacaaaagcaatatctc
ggtatatataaacttactaatgcacgagataatcaaccgatttttgttcaaattgataat
attaaacgtatacgtaccaaaaacggtcaaaatatggcttttgtaacactaaatgatgga
gttaatagtttggatggggtcgtttttccagatacattcaaaaaatatgaaacagatttg
aaaacggatgagacatttatcctaaaaggtaagtttgaaaataggaataataagaagcag
cttattattaatcagatagagacggttgaagcttttgaagtgagtacatttgaacaagcg
aaacaaattgtaattagaaacctaagcgatgaaacagaattaaagcaatttttaacacaa
acagaaaatagtaactatattcctattaagtatttccaagaggagcaaaataagttcaaa
atcataggttatatcacacgtgataacgacgtattaaatacatttatacaacggttttcc
ccttgggatataagaattatttaa
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