Staphylococcus equorum: SE1039_17720
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Entry
SE1039_17720 CDS
T04160
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
seqo
Staphylococcus equorum
Pathway
seqo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
seqo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SE1039_17720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seqo03019
]
SE1039_17720
03009 Ribosome biogenesis [BR:
seqo03009
]
SE1039_17720
Enzymes [BR:
seqo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SE1039_17720
Messenger RNA biogenesis [BR:
seqo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SE1039_17720
Ribosome biogenesis [BR:
seqo03009
]
Prokaryotic type
rRNA helicases
SE1039_17720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
AAA_30
Cas3-like_C_2
Flavi_DEAD
vATP-synt_E
Motif
Other DBs
NCBI-ProteinID:
ALM57555
UniProt:
A0A9X4L6W3
LinkDB
All DBs
Position
complement(1849403..1850926)
Genome browser
AA seq
507 aa
AA seq
DB search
MQKFKELGLSDKMAETLASMGFDDATPIQKESIPLALEGKDVLGQAQTGTGKTGAFGIPL
VEKVADKEGVQSLILAPTRELAMQVAESIREFAKGQNVQVVTVFGGMPIDRQIKSLKKGP
QIVVGTPGRVIDHLNRRTLKTNDVHTLILDEADEMMNMGFIDDMKFIMDKIPASQRQTML
FSATMPKAIQTLVQQFMKTPVIVKTMNNEMSNPQIEEYYTIVKELEKFDTFTNLLDVHQP
ELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQLDILVATDVA
ARGLDISNVSHVYNFDIPQDTESYTHRIGRTGRAGKKGVAITFVNPIEMDYIRQIEQANK
RQMTAMRPPHRKEVLKARENDIKGKVEKWMSRENEPRLQRIASELIEEYSDVDLVASLLQ
ELVESNDEVDVQLTFEKPLSRGKGGRQGRGPKRGGQGNNKRGNKFDNKNRRSKGGFNNNN
KKNEKSSDRNNSNKKSMKGRTFADHKK
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaaatttaaagaattagggctctcagataagatggcagaaaccctagcatcaatg
gggttcgatgacgccactcctatacaaaaagagagtatccctcttgccttagaaggcaaa
gacgttcttggtcaagctcaaacaggcacaggtaaaactggtgcgtttggtattccactt
gttgaaaaagtggcagacaaagaaggcgtacaatcattaatccttgcaccaacaagagaa
ttagctatgcaagtagctgaatcaatcagagaatttgctaaaggtcaaaacgtacaagtt
gttactgtatttggtggtatgccgatcgaccgtcaaatcaagtcacttaaaaaaggaccg
caaatcgttgtaggtacgccaggtcgtgtgattgatcaccttaaccgtcgtacattaaaa
actaatgatgttcatacgcttatattagatgaagcggatgaaatgatgaacatgggcttc
atcgatgatatgaaatttatcatggataaaattccagcttcacaacgccaaacaatgctg
ttttcagctacaatgccaaaagctattcaaacattagttcaacaattcatgaaaacacca
gtaattgttaaaacaatgaataacgaaatgtctaatccacaaatcgaagaatactataca
atcgtaaaagaattggaaaaattcgatacatttacgaatttattagatgtacaccaacca
gaattagctattgtattcggccgtactaaacgtcgtgtagatgaattaacaagtgcgtta
atctctaaaggctacaaagctgaaggtttacatggtgacattactcaagcgaaacgtttg
gaagtattgaaaaaattcaaaaatgatcaattagatatcttagttgcaacagatgttgca
gcacgaggacttgatatttcaaacgtaagtcatgtttataactttgatattcctcaagat
actgaaagttatacacacagaatcggccgtactggtcgtgctggtaaaaaaggtgtagca
atcacatttgtgaacccaattgaaatggattacatccgtcagattgaacaagcaaacaag
agacaaatgactgcaatgagaccacctcatcgtaaagaagtgcttaaagcgcgtgaaaac
gatattaaaggtaaagttgaaaagtggatgtctagagaaaatgaaccaagattacaacgt
attgcttcagaattaattgaagaatatagtgatgttgatttagttgcttcattattacaa
gaattggttgaatcaaatgatgaagttgatgttcaattaacatttgaaaaaccattatct
cgtggtaaaggtggtcgtcaaggccgcggaccaaaacgtggcggtcaaggcaacaataaa
cgtggtaataaatttgataacaaaaatcgtcgttcaaaaggcggattcaacaacaataat
aagaagaacgaaaagtcttctgatagaaacaatagcaataagaaatcaatgaaaggtcgc
acattcgctgaccacaaaaaataa
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