KEGG   Prodigiosinella confusarubida ATCC 39006: Ser39006_004960
Entry
Ser39006_004960   CDS       T05290                                 
Name
(GenBank) methionine synthase
  KO
K00548  5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Organism
sera  Prodigiosinella confusarubida ATCC 39006
Pathway
sera00270  Cysteine and methionine metabolism
sera00450  Selenocompound metabolism
sera00670  One carbon pool by folate
sera01100  Metabolic pathways
sera01110  Biosynthesis of secondary metabolites
sera01230  Biosynthesis of amino acids
sera04981  Folate transport and metabolism
Module
sera_M00017  Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:sera00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    Ser39006_004960
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    Ser39006_004960
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    Ser39006_004960
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    Ser39006_004960
   04980 Cobalamin transport and metabolism
    Ser39006_004960
Enzymes [BR:sera01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.13  methionine synthase
     Ser39006_004960
SSDB
Motif
Pfam: Met_synt_B12 S-methyl_trans Pterin_bind B12-binding_2 B12-binding
Other DBs
NCBI-ProteinID: AUH03537
UniProt: A0A2I5T3W7
LinkDB
Position
1052305..1055991
AA seq 1228 aa
MATNRLNELQQQLAQRIMILDGGMGTMIQSYHLQEEDYRGARFADWPSDLKGNNDLLVLT
KPDVITAIHDGYLEAGADILETNTFNSTRIAMADYDMAALSAEINTAAARLARACADEWS
TRTPNKPRYVAGVLGPTNRTASISPDVNDPAFRNVSFDQLVDAYRESTRALIEGGVDLIM
LETIFDTLNAKAAVFAVESEFEALGITLPVMISGTITDASGRTLSGQTTEGFYNALRHAR
PLSFGLNCALGPDELRQYVAELARIAECYVTAHPNAGLPNAFGEYDLDAQAMAQQIGEWA
RAGFLNIVGGCCGTTPQHIAAIARVVEGVAPRPLPTIPVACRLAGLEPLNIADDTLFVNV
GERTNVTGSARFKQLIKEEKYNEALAVARQQVESGAQIIDINMDEGMLDAKAAMMRFLNL
IAGEPDIARVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGEDIFLHHAKLVRRYGAA
VVVMAFDEVGQADTRARKIDICRRAYRLLTEEVGFPPEDIIFDPNIFAVATGIDEHNNYA
VDFIEACADIKAQLPHALISGGVSNVSFSFRGNNPVREAIHAVFLYYAIRNGMDMGIVNA
GQLAIYDDLPAELRDAVEDVILNRRNDATEQMLGLAEKYRGSKSEGDSNKPQHEWRSWPV
KKRLEYSLIKGITEFIEQDTEEARQQSERPIEVIEGPLMDGMNVVGDLFGAGKMFLPQVV
KSARVMKQAVAYLEPFIEASKAKGSTAGKILLATVKGDVHDIGKNIVGVVLQCNNYEIID
LGVMVPTDKILKTAREENVDIIGLSGLITPSLDEMVNVAKEMERQGFTLPLLIGGATTSK
AHTAVKIEQNYSGPTVYVQNASRSVGVVSALLSDTQHDEFVARIRKEYETVRIQHGRKKP
RTPPVSLEAARDNAQAIDWKNYTPPVAHRLGVQQVSAGIETLRNYIDWTPFFMTWSLAGK
YPRILEDDVVGEEAKRLFADANAMLDSLAAEGALNPRGVVGIFPANRVGDDIEIYTDEHR
NEVRAVGHHLRQQTEKIDFPNYCLADFVAPKSSGKPDYIGAFAVTGGLEEDLLAEQWEAQ
HDDYNKIMLKALADRLAEAFAEYLHERVRKVYWGYAPNENLGSDELIRENYQGIRPAPGY
AACPEHTEKATIWQLLDVDNQAGMKLTESYAMWPGASVSGWYFSHPESKYFAVAQIQRDQ
VEDYALRKQMTVSEVERWLAPNLGYDAD
NT seq 3687 nt   +upstreamnt  +downstreamnt
atggcgacgaatcggttaaacgaattacaacagcagttggcacaacgcattatgattttg
gatggtggcatgggaaccatgatccagagttatcatttgcaggaagaggattatcgcggc
gcccgttttgctgactggcctagcgatctgaaaggcaacaatgacctgttggtgctgact
aagccggatgtgattaccgctattcatgatggttacctggaagcgggtgccgatattctg
gaaaccaatacctttaactcgacccgcattgccatggccgattatgacatggcggcgttg
tcggctgagattaacaccgctgccgcccgattggcacgcgcctgtgccgatgaatggagt
acacggacaccgaataaaccgcgttatgtcgcgggtgttcttgggccaaccaaccgcact
gcctcaatatcaccagatgtgaacgacccggcattccgcaatgtcagctttgatcaactc
gttgatgcttatcgggaatccacccgtgcactgatcgagggtggtgtcgatttgattatg
ctcgaaaccatttttgacacgctaaatgccaaagcggcggtatttgcggtagaaagcgaa
tttgaggcgttgggtatcacgctgccggtgatgatttctggcacgattaccgacgcctcc
ggccgtacgctgtctggccagacgacggaaggattctacaatgcactgcgtcatgccagg
ccgttgtcgtttggtcttaactgtgcgctggggccggatgagttacgacagtatgtggcg
gaattggcgcgtattgccgaatgttatgtcaccgcgcatcctaacgcgggtctgcccaat
gcgtttggcgagtacgacctggatgcacaggcgatggcgcagcagattggtgaatgggcg
cgcgccgggtttttaaatattgtgggtgggtgctgtggtactacgccgcagcatattgcc
gctatcgcccgagtcgtggaaggtgtggcaccgcggccgctgccaaccattccggtagcc
tgtcgtctggcagggctggagcccttgaacatcgctgatgacacgctgttcgtcaatgtt
ggtgagcgtaccaatgtaaccggttcggctcgttttaaacaattgataaaagaagaaaaa
tataacgaagcgctggcagtggcccgccaacaggtggaaagcggtgcacagattatcgac
atcaacatggatgagggaatgctggatgccaaagcggcgatgatgcgttttctcaatctg
attgccggtgagccggatatcgcccgcgtccccatcatgattgactcttccaaatgggag
gtgatcgaagccgggctgaaatgtattcagggcaaaggtatcgtcaactcgatttccatg
aaggagggggaagatatttttctccatcacgccaaattggtacgacgctatggcgcggcc
gttgtcgtgatggcgtttgatgaagtagggcaggcggatacccgggcccgcaagattgat
atttgtcgccgggcctatcgcctcctgacagaagaggttggcttcccgccggaagatatt
attttcgaccccaatatttttgccgtggcgaccggcattgacgaacataacaactatgcc
gttgatttcattgaagcctgtgccgatattaaagcgcaattgccgcacgcgttgatttcc
ggtggtgtgtctaacgtgtcgttctcattccgtggcaataatccggttcgtgaagccata
cacgctgtattcctgtattacgctatccgtaatggtatggatatggggattgtgaatgca
ggtcagttggcgatctatgatgatttacccgccgagctgcgtgatgcggtggaggatgtg
attcttaaccgtcgcaacgatgcaacggaacagatgctgggtctggcggaaaaataccgt
ggtagcaaatccgagggtgacagcaataaaccgcaacacgagtggcgtagctggccggtg
aaaaaacggctggagtattctctgatcaaagggattaccgaatttattgagcaggatacc
gaggaggcacgccaacagtcagaacgcccgattgaggtgattgaagggccgctgatggat
ggtatgaatgtggtgggcgatctgttcggcgccgggaaaatgtttctgcctcaagtcgtg
aagtccgcccgagtgatgaagcaggcggtagcctatctggaaccttttattgaagccagc
aaggcgaaaggttccaccgccgggaaaatcctgttggcaacggttaaaggcgatgtacat
gatatcggcaagaacattgtgggtgtcgtgttgcagtgtaataactacgagattatcgat
ctgggcgtgatggttcccaccgataaaattttgaaaaccgcacgggaagagaacgtcgat
attatcgggttgtcggggttgatcacgccatccctggatgaaatggtgaacgtggcaaaa
gaaatggaacggcagggctttacgctgccgttgctgatcggtggtgccaccacatctaaa
gcgcataccgcagtgaagatagaacaaaactacagtggtccaaccgtctacgtacaaaat
gcttcacgttccgtcggggtcgtatcggcgttgctgtcagacacgcaacacgacgaattt
gtcgcccgtatccgcaaagagtatgaaacggtgcgcattcagcatggtcgtaaaaaacca
cgtaccccgccggtgtcattggaagcggcacgggataatgcccaggccatcgactggaaa
aattacacgccgccagtggcgcatcgacttggtgtacagcaggtttccgccggcattgaa
accctgcgtaactatattgactggacaccgttcttcatgacctggtcgctggctggcaaa
tatccgcgcattctggaagatgatgtggtgggtgaagaagccaaacggttgtttgccgac
gcgaatgccatgctggattcattggccgcagagggagcgctcaatcctcgtggtgtggtc
gggatatttccggccaatcgtgtcggtgatgatattgagatttacactgatgagcatcgc
aatgaggtacgtgcggtaggccatcatttgcgccagcaaaccgaaaaaatcgacttccct
aactattgtctggccgattttgtcgccccgaaatccagtggaaagccagactatatcgga
gcatttgccgttaccggtgggttggaagaggatctgctggcggaacagtgggaagcgcaa
catgatgattacaacaagatcatgctcaaagcgctggcggatcgtttggcggaagccttt
gccgaatatttgcacgaacgggtacgtaaggtttactggggatacgcgccgaatgaaaat
cttggtagcgatgagctgattcgtgaaaattatcaaggtatccgcccggctccggggtat
gcggcgtgcccggaacataccgagaaagctaccatctggcagctactggatgtggacaat
caagcaggaatgaagttgacggaatcctatgccatgtggccgggtgcctcagtatccggc
tggtatttcagccaccctgaaagtaagtattttgccgtagcacagattcagcgcgatcag
gtggaagactacgccctgcgcaagcagatgacggtaagtgaagttgaacgctggttagcc
ccgaatctggggtatgacgcggattaa

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