Prodigiosinella confusarubida ATCC 39006: Ser39006_010770
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Entry
Ser39006_010770 CDS
T05290
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera01501
beta-Lactam resistance
sera01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Ser39006_010770
01503 Cationic antimicrobial peptide (CAMP) resistance
Ser39006_010770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sera03036
]
Ser39006_010770
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sera02000
]
Ser39006_010770
01504 Antimicrobial resistance genes [BR:
sera01504
]
Ser39006_010770
Chromosome and associated proteins [BR:
sera03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Ser39006_010770
Transporters [BR:
sera02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Ser39006_010770
Antimicrobial resistance genes [BR:
sera01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Ser39006_010770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
RND-MFP_C
Beta-barrel_RND
HH_MFP_RND
Beta-barrel_RND_2
BSH_CzcB
YknX_C
BSH_CusB
CzcB_C
S_4TM
DRY_EERY
Motif
Other DBs
NCBI-ProteinID:
AUH04564
UniProt:
A0A2I5T6R7
LinkDB
All DBs
Position
2334314..2335456
Genome browser
AA seq
380 aa
AA seq
DB search
MRSKTFLLLMVFSLVGCDSATSPKVDHAPVTVVVKTLKTQSVVLSSELTGRVTAAMVSDV
RPQVDGIIQKRLFTEGSEVKAGQVLYQIDPASYQASYDQAVAALKNAEATVRSAKLKAER
YARLVKEDGVSRQDADDAQASYEEDVATVAEKKASLETARINLAYTKIKAPISGRIGISS
VTPGALVTADQTTSLATIRQLDPIFVDLTQSSSQRLAMREQQKNAQTPVTLTLENNKPYA
QKGILKLAELSVDESSGTVTVRAEFPNPQETLLPGMFVRASVEDGVDPTAVLAPQQGITR
DVKGNATALVVNDKQQVEQRQVVTGQAIGNQWLVTSGLKAGDRLIIEGTDKVAPGDTVQP
VEDGSTAQQPSPTANNTGNR
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagtaaaacatttcttttattgatggtcttttctctggtgggttgtgatagtgct
accagcccaaaagttgaccatgctccggtaacggtggtggtcaaaacgttgaaaacccag
tcagtcgtgctgagcagcgaattgaccggacgagtcacggcagcaatggtgtctgatgtc
cggccgcaggtggacggaattatccagaaacggctgtttaccgaaggcagtgaagtgaaa
gccggacaagtgctgtatcagatcgaccccgccagttatcaagcgtcttatgatcaagcc
gtggcggcgttgaaaaacgcagaggctacggtgcgttcggccaaattgaaagccgaacgt
tatgcccggctggtgaaggaagatggcgtttcccgacaggatgctgatgatgcacaagcc
agctacgaggaagacgtggccacggtagcggaaaaaaaagcatcactggaaactgcacgg
attaatctggcttataccaaaatcaaggccccgatcagtgggcgtatcggtatctcttcg
gtgactccaggggcgctggtaacggcagatcagactacctcactggctactattcgccag
ctcgatcctatttttgttgacttaacccagtccagtagtcagcgactggcaatgagagaa
cagcagaagaatgcgcagacgccggtaacactgacattggaaaataataaaccctatgcg
cagaaagggatcctgaaactggcagagttgtcagtggatgaatccagtggcaccgtaacg
gtgcgggctgaatttcccaatccacaggaaaccctgttacctggaatgttcgtccgcgca
tcggtggaagatggtgttgatcccacagcggttctggcgccacagcagggcatcacccgg
gatgtgaaaggcaacgcgacggcactggtagtgaatgataaacaacaggtcgaacagcgt
caggtggttaccgggcaggctattggtaaccaatggctagtcacttccggactgaaggcc
ggtgaccggttgattattgaaggtaccgataaggtagcgcccggcgatacagtacaacca
gtagaagacggttcgactgctcaacaaccctcaccgacagccaataatacagggaatcgt
taa
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