Prodigiosinella confusarubida ATCC 39006: Ser39006_015945
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Entry
Ser39006_015945 CDS
T05290
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sera03009
]
Ser39006_015945
Enzymes [BR:
sera01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
Ser39006_015945
Ribosome biogenesis [BR:
sera03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Ser39006_015945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
MTS
Methyltransf_31
Methyltransf_15
Methyltransf_25
Cons_hypoth95
Methyltransf_12
Methyltransf_11
UPF0020
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
AUH05493
UniProt:
A0A2I5TLP6
LinkDB
All DBs
Position
complement(3494500..3495639)
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AA seq
379 aa
AA seq
DB search
MQCARYNEGTCRSCQWLEKPYPQQLADKQQHLAELLASHPVREWLPAYASKPSAFRNKAK
MVVSGSVERPLLGMLHRDGSAVDLCDCPLYPPGFATVFAVLKTFIARAGLTPYNVARRRG
ELKYLLLTQSTFSGAFMLRIVLRSETKLTQLQNALPWLQQQLPQLLVISANIQPVHQAIM
EGAREIPLSEQQTLEEQFNQVPLYIRPQSFFQTNPQVAAALYDTARHWVAELNVRSLWDL
FCGVGGFGLHCATQHTRLTGIEINAEAIACARHSAERLGLAAVEFQALDSTGFAIGKEDV
PDLVIVNPPRRGIGVELCQYLSRMAPDAILYSSCNAQTMAKDMAMLADYQAVRIQLFDMF
PHTAHYEVLTLLQRNAPAV
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgcgcacgctacaacgaaggaacctgccgttcctgccaatggctggaaaaaccc
tacccacagcaactggcggataaacagcaacatttggcggagttactggcttcacatccg
gttcgtgagtggttgccggcctatgcgtcgaaaccgtctgcctttcgcaataaggccaaa
atggtggtcagcggcagtgtggaacgaccattattgggaatgctgcaccgtgatggatcg
gccgtggatctgtgtgattgtccgctctatccgcctggcttcgccacggtgtttgctgtt
ctgaaaacatttatcgcccgcgcgggtctgacgccctataacgtggcccggcgtcgtggt
gaacttaaatacctgttgctgacgcaaagtaccttcagtggcgcgtttatgctgcgcatt
gtattacgttcggaaaccaaactgacgcagttgcagaatgcattaccctggttacaacag
caattgccgcaactgttagtgatttccgccaatatccagccggttcatcaggccattatg
gaaggggcgcgggagatcccattgagtgagcagcaaacgctggaagagcaattcaatcag
gtgccgctctatatccgtccccagagctttttccagaccaatccccaggttgccgccgcg
ctttatgacactgcccggcattgggtggcggagttgaatgtgcgtagcctgtgggatcta
ttttgtggtgtgggaggattcggcctgcattgcgcgacacaacatacccgcctgactggc
attgaaatcaatgccgaggcgattgcctgcgcccgccattcggcggaacgtctgggattg
gcagccgttgagtttcaagctctggactcaaccgggttcgctatcggcaaagaggatgtg
ccggatctggtgattgttaatccgccgcgacggggtattggcgtcgagttgtgtcagtat
ctgagccgtatggcgccggatgccattctgtactcaagttgcaatgcgcaaaccatggcg
aaggatatggcgatgctggcggattatcaggcagtacggatacaactgttcgatatgttc
ccacatacggcacattatgaagtccttacactgctgcaacgaaatgcgccagcagtgtaa
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