Prodigiosinella confusarubida ATCC 39006: Ser39006_018850
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Entry
Ser39006_018850 CDS
T05290
Name
(GenBank) MexE family multidrug efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera01501
beta-Lactam resistance
sera01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Ser39006_018850
01503 Cationic antimicrobial peptide (CAMP) resistance
Ser39006_018850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sera03036
]
Ser39006_018850
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sera02000
]
Ser39006_018850
01504 Antimicrobial resistance genes [BR:
sera01504
]
Ser39006_018850
Chromosome and associated proteins [BR:
sera03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Ser39006_018850
Transporters [BR:
sera02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Ser39006_018850
Antimicrobial resistance genes [BR:
sera01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Ser39006_018850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CusB_dom_1
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
AUH06003
UniProt:
A0A2I5TAS1
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All DBs
Position
4144361..4145545
Genome browser
AA seq
394 aa
AA seq
DB search
MNKNRRLTPLAAVLMLSGGLMLTGCDNKGNQQGAHQSLPEVGIVTIAAQPLNITTELPGR
TSAYRIAEVRPQVTGIILKRNFVEGSDVKAGSSLYQIDPATYQAQYNNAKALLSQAQANA
AIAHLTVKRYKPLLGTNYISKQDYDQAVATARQDDASVEAAKASLDSAQINLAYTRVTAP
ISGRIGKSTVTEGALVSNGQSTALTTIQQLDPIYVDVTQSSNDFLRLKKEMEDGTLEQSN
GKANVRLLLENGIEYAQKGTLEFSDVTVDETTGSITLRAVFPNPQHNLLPGMFVRARLDS
GINNNAILVPQQGVSRTPRGDATVMVVDKDNKVEVRSIVATQAIGDNWLVTSGVKSGDRV
IVSGLQKIRPGIQVKAQEVTSDNTQQPQAQPAKS
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaacagaaggcttacacctctggcagcagtgctgatgctttctggcggctta
atgctcacgggatgtgataataaagggaaccaacagggggcacatcaaagccttcctgag
gtcggcatcgtcacgatagctgcacaacctctcaatatcacaacagaactccctgggcgc
acgagcgcttatcgtattgcagaagttcgtcctcaggtaaccggtattatcctgaaaaga
aatttcgtagaaggcagcgatgtcaaagcaggctcatcgttataccaaattgatcctgct
acctatcaggcacagtacaacaatgccaaagccttactgtctcaggcccaggctaacgca
gcaatcgctcatctgacagttaagcgctataaacccttgttgggtaccaattacatcagc
aagcaggattatgaccaggcggttgctactgctcgtcaggatgatgcatcagtagaagcc
gcaaaagcgtctctggattcagcacagatcaacctggcttatacgcgggtgaccgcgccg
atctccggtcgaattggtaaatcaaccgtcactgaaggtgcgctggtttccaacggccag
tccacagctttaacaacgattcagcagctcgacccaatctatgttgacgtaacccaatcc
agtaacgattttttgcgtctaaaaaaagagatggaagacggcacactggagcagagtaat
gggaaagccaacgtccgattattactggaaaacgggattgagtatgcccaaaaaggtacg
ctggaattttctgatgtcactgtagatgaaaccaccggttctattactctgcgagccgta
tttcccaatccacagcataacctgctgccaggtatgtttgtgcgtgcgcgtttagattcc
ggtataaacaacaacgccattctggtacctcaacagggagtaagcagaacaccacgcggt
gatgccacggtaatggtggtggataaagataataaagtggaagttcgctcgattgtcgcc
actcaagcgattggagacaactggctggtgacatccggtgttaaatctggtgatcgcgtg
attgtttctggcctgcaaaaaatcagaccaggcatccaggtaaaagcccaggaagtgact
tccgataatacccaacaacctcaggcacagcccgctaagtcttaa
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