Serratia sp. FS14: L085_00225
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Entry
L085_00225 CDS
T03313
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
serf
Serratia sp. FS14
Brite
KEGG Orthology (KO) [BR:
serf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
serf03016
]
L085_00225 (truD)
Enzymes [BR:
serf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
L085_00225 (truD)
Transfer RNA biogenesis [BR:
serf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
L085_00225 (truD)
Prokaryotic type
L085_00225 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
SHOCT
Motif
Other DBs
NCBI-ProteinID:
AIA45512
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Position
complement(45846..46892)
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AA seq
348 aa
AA seq
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MDMANLTWLHGRPQSSGVLKANPEDFVVVEDLGFAPDGEGEHVLVNIRKNGCNTQFVADY
LARFAGIHARSVSYAGLKDRHAVTEQWFCLHMPGKDTPDFSRFTLEGCEVLSFARHLRKM
RIGNLKGNHFTLVLRQISDRQDVERRLQAIAAQGVPNYFGSQRFGRGGNNLVMACRWAND
EIRVKERSKRSFYLSASRSALFNLIASQRLADGLQRTVLEGDALQLSGRGSWFVAKADEL
ETLQQRLDAGELVVTAALPGDGEPGTVGDALAFEQRCLAEQPELITLLKRERVEPARRAL
LLQPQNLQWNWWDDVTVELRFWLPAGSFATSVVREIMQQDNSDADIAE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggatatggcgaatctgacctggctgcatggccggccgcagagttccggggtgttgaaa
gccaatccggaagattttgtggtggtcgaagatctgggctttgcgccggacggtgaaggt
gagcacgtgctggtaaatatccgtaaaaacggctgcaatacccagttcgtggccgactat
ctggcgcgcttcgccggtattcacgcccgttctgtcagctatgccggtttgaaggatcgc
cacgcggtgaccgaacagtggttctgcctgcatatgccgggtaaggacacgccggatttc
tcccgatttacgctggaaggctgcgaggtgctctcgttcgcccgccacctgcgcaaaatg
cgcatcggcaatctgaagggcaaccactttacgctggtgctgcgccagatttccgatcgg
caggacgtggaacgtcgcctgcaggccatcgccgcgcagggcgtgccaaactatttcggc
agccaacgcttcggccgcggcggcaacaacctggtgatggcgtgccgctgggcgaacgac
gaaattcgtgtcaaagagcgcagtaagcgcagcttctacctgtccgccagccgcagcgcg
ctgttcaatctgatcgcgagccaacgcctggctgacgggctgcagcgcaccgtgctggaa
ggggatgccctgcagctgagtgggcgcggcagctggttcgtcgccaaagccgatgagctg
gagacgcttcaacagcgtttggatgccggtgaactggttgtcaccgcggcattgccgggc
gacggcgaaccgggcactgtcggcgacgcgttggcgtttgaacaacgatgcctggcggag
cagccggaattgattacgcttttaaagcgcgagcgtgttgaacccgctcgtcgggccctg
ctgttgcagccgcaaaatttgcagtggaactggtgggatgacgttaccgtggaactgcgc
ttctggctgccggcgggcagctttgctaccagcgtggttcgcgagatcatgcagcaggat
aacagtgatgcggatattgctgagtaa
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