Serratia sp. FS14: L085_00590
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Entry
L085_00590 CDS
T03313
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
serf
Serratia sp. FS14
Pathway
serf00061
Fatty acid biosynthesis
serf00071
Fatty acid degradation
serf01100
Metabolic pathways
serf01212
Fatty acid metabolism
serf02024
Quorum sensing
serf04146
Peroxisome
Module
serf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
serf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
L085_00590
00071 Fatty acid degradation
L085_00590
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
L085_00590
09145 Cellular community - prokaryotes
02024 Quorum sensing
L085_00590
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
serf01004
]
L085_00590
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
serf04147
]
L085_00590
Enzymes [BR:
serf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
L085_00590
Lipid biosynthesis proteins [BR:
serf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
L085_00590
Exosome [BR:
serf04147
]
Exosomal proteins
Exosomal proteins of breast milk
L085_00590
Exosomal proteins of breast cancer cells
L085_00590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AIA45585
LinkDB
All DBs
Position
complement(128946..130754)
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AA seq
602 aa
AA seq
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MITNLLQYHLIHRIQHQITHRADRTAFRQWSPNGEFQLTWGAAAARIDRIAAGLLALGAE
VQERIGIFANNTMAWSLTDLAILHLRGVSVPLYSTNTPAQAAFVINDADIRILFVGEQAQ
LDAAIALRGVCPQLSHIIVFDEDADLRGCELAQHLSAFERAADPAAFIAQRRQRIEECDL
QDLFTLIYTSGTTGEPKGVMLDYRNLAAQLYLHDERLTVGEEDVSLSFLPLSHVFERAWS
FFVMHSGAQNVFLPNTDWVREAMGQVRPTLMCAVPRFYEKIFSAVHEKVARAPWLRRALF
HWAIVCGERKFLQERAGKPLGKLFELSHRWADKLVLSKLRGILGGRVRFLPAAGAKLDDN
VILFFQAMGVNIKYGYGMTETCATVSCWEEGHFRFGSIGKPLPEVEVRIGEENEIQVRGP
IVMRGYFNKPLETAATFTADGWLKTGDAGAIDEEGNLFITERLKDLMKTSGGKYIAPQML
EGTLAQDRFIEQVAIIADARKFVSALIVPCFESLEEYAKSVNLKYQDRLELLRNGEILAM
FEKRLREMQKELARFEQVKKFTLLPAAFSMELGELTPTLKLRRKVILQRYQREIDSMYQE
QA
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgatcactaatctgctgcaataccatttgatccatcgtatacagcatcaaatcacccac
cgagccgatcgcacagcatttcgccaatggtcgcccaacggcgagtttcaactgacctgg
ggagcggcggctgcccgcattgatcgcattgctgccgggctgctggcgctgggcgccgaa
gtgcaagaacgtatcggtatcttcgccaataacacgatggcctggtcgttgaccgatctc
gcgatcctgcacctgcgtggcgtcagcgtaccgctctattccaccaatacgccggcgcag
gcggccttcgtcatcaacgacgctgacattcgcatcctgttcgtcggcgagcaggcgcag
ctggatgccgccatcgcactgcgtggcgtctgcccacagctgagtcatatcatcgtgttc
gacgaggacgccgatctgcgcggctgcgagctcgcacaacacctgagcgccttcgagcgc
gctgccgatccggcggcttttatcgctcaacgtcggcagcgcattgaagagtgcgacctg
caggatctctttaccctgatctatacctcgggcaccaccggcgaaccgaaaggggtaatg
ctggactaccgcaacctggcggcgcagctctacctgcacgatgagagactgacggtcggc
gaagaggatgtgtcgctcagtttcctgccgctgtcgcacgtgttcgagcgtgcctggagc
ttctttgtcatgcattccggcgcgcagaatgttttcctgccgaacaccgactgggtacgg
gaagcgatggggcaggtgcggccgacgttaatgtgcgcggtaccgcgtttctacgagaag
attttcagcgcggtgcatgaaaaagtggcgcgtgccccttggctgcgccgtgcgctgttc
cactgggcgatcgtctgcggggagcgcaagttcctgcaagagcgggccggcaaaccgttg
ggcaaactgttcgaactctctcaccgctgggccgacaagctggtattgagcaagctgcgc
ggcattctcggtggccgggtgcgtttcttgccggcggcgggcgccaagctggatgacaat
gtgatcctgtttttccaggcgatgggtgtcaacatcaagtacggctacggcatgaccgaa
acctgtgcgaccgtgtcctgctgggaagaggggcatttccgcttcggctctatcggtaaa
ccgctgccggaggtcgaggtgcgcatcggtgaagaaaatgaaattcaggtgcgcgggccg
atcgtgatgcgcggctatttcaacaaaccgttggaaaccgccgcgacctttaccgccgac
ggctggctgaaaaccggcgacgccggggcgatcgatgaagagggcaatctgttcatcacc
gagcgcctgaaagatttgatgaaaacctccggcggcaaatacatagcgccgcagatgctg
gaaggcacgctggcgcaggaccgctttatcgagcaggtggcgatcatcgccgatgcgcgc
aagttcgtttccgcgctgatcgtgccgtgctttgagtcgctggaagagtacgcgaagtca
gttaacctgaaataccaggatcgcctggagctgctgcgcaacggcgagatcctcgcgatg
ttcgaaaagcgcctgcgcgagatgcaaaaggagctggcgcgtttcgagcaggtgaagaag
ttcacgctgctgccggcggctttttccatggagttgggggagctgacgcccacgctgaag
ctgcgccgcaaagtgatcctgcagcgctatcagcgcgaaatcgactcgatgtaccaggaa
caggcctga
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