Serratia sp. FS14: L085_01915
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Entry
L085_01915 CDS
T03313
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
serf
Serratia sp. FS14
Brite
KEGG Orthology (KO) [BR:
serf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
serf03016
]
L085_01915 (truB)
Enzymes [BR:
serf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
L085_01915 (truB)
Transfer RNA biogenesis [BR:
serf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
L085_01915 (truB)
Prokaryotic type
L085_01915 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AIA45847
LinkDB
All DBs
Position
complement(422506..423450)
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AA seq
314 aa
AA seq
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MSRPRRRGRDIHGVLLLDKPQGLSSNDALQKVKRLYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIAKLGQRTDTSDADGQIVQERPVNFTQAQLDAALDTFRGDIQ
QVPSMYSALKYQGKKLYEYARQGIEVPREARSITVYELQFIRWEGDELELEIHCSKGTYI
RTITDDLGELLGCGAHVIYLRRLQVATYPIARMVTLEQLNAKLAQAQEQAIAPGELLDPL
LMPMDSPVENYPEVNLLPVVAGYVKQGQPVQVAGAPASGMVRITEGEERKFIGVGDIAED
GRVAPRRLVVEHFD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgccctcgtcgccgcggccgtgatatccacggcgtgctgttgctggacaagccg
cagggtttgtcgtccaacgatgcgctgcaaaaagtaaagcgcctgtacaacgccaaccgg
gcgggccataccggcgcgctcgatccgttggcgaccggcatgctgcctatctgcctgggc
gaagcgaccaagttttcgcaatatctgctcgattccgacaagcgttatcgggtgatcgcc
aaactggggcagcgtaccgatacctcggacgccgacggtcagatcgtgcaggagcgcccg
gtgaactttacccaggcgcagctcgacgcggcgctggacaccttccgcggtgacatccag
caggtgccgtcgatgtattcggcgctgaaataccagggcaagaaactctacgagtatgcg
cgccaggggattgaagtgccgcgcgaagcgcgcagcatcacggtgtacgagctgcagttt
atccgctgggaaggggatgagctggagctggagatccactgctcgaaaggtacctacatc
cgcaccatcaccgacgatctcggcgagctgctgggctgcggcgcgcacgtgatctatctg
cgccgcctgcaggtggcgacttacccgatcgcgcgcatggtgacgctggaacagctgaac
gccaagctggcgcaggcgcaggaacaggcgatcgcgcccggcgagctgctcgatccgctg
ctgatgccgatggacagcccggttgagaactatccggaagtgaatttgctgccggtggtg
gcgggctacgtcaagcaggggcagccggtgcaggtggccggcgcgccggcttccggcatg
gtgcgtatcaccgagggtgaagagcggaaattcatcggcgttggcgacatcgccgaggat
ggtcgcgtggcgccgcgccgcctggtggtcgaacatttcgactga
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