Serratia sp. FS14: L085_04310
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Entry
L085_04310 CDS
T03313
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
serf
Serratia sp. FS14
Pathway
serf03030
DNA replication
serf03410
Base excision repair
serf03420
Nucleotide excision repair
serf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
serf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L085_04310
03410 Base excision repair
L085_04310
03420 Nucleotide excision repair
L085_04310
03440 Homologous recombination
L085_04310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
serf03032
]
L085_04310
03400 DNA repair and recombination proteins [BR:
serf03400
]
L085_04310
Enzymes [BR:
serf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L085_04310
DNA replication proteins [BR:
serf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
L085_04310
DNA repair and recombination proteins [BR:
serf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
L085_04310
NER (nucleotide excision repair)
GGR (global genome repair) factors
L085_04310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Ribosomal_60s
HHH_5
Unstab_antitox
Motif
Other DBs
NCBI-ProteinID:
AIA46316
LinkDB
All DBs
Position
complement(936529..939327)
Genome browser
AA seq
932 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLLLQYQPSHVAV
VFDAKGKTFRDELFAEYKSHRPPMPDDLRAQIEPLHNMVKAMGLPLLVTPGVEADDVIGT
LALEAEKAGHAVLISTGDKDMAQLVTPNVTLINTMNNTILGPQEVCDKYGIPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGIGGLDALYGNLENIATLSFRGAKTMAAKLEQNK
EVAYLSYKLATIKTDVELDLTCADLTVSEPDVDTLQQLFKQYEFKRWLADVEAGVWLENK
KGAGAKAAGAAKPAAAVEAPKALAEAKLSQDGYVTILDEATFTDWLTRLKKADVFAFDTE
TDGLDTLTANLIGLSFAIAPGEAAYLPVAHDYLDAPAQLDRAYVLEALKPLLEDEKALKV
GQNLKFDMSLLARYGIEMRGIAYDTMLESYVLDSVGGRHDMDSLADRYLGHKTITFEEIA
GKGKNQLTFNQIALEQAAPYAAEDADVTLQLHLAMWPQLKQSAELLTVFNEIEMPLLPVL
SHIERTGVLIDPAILSAHSQELAKRLAELEAQAHELAEEPLNLASTKQLQAILYEKQKLP
VLKKTPGGAPSTNEEVLAELALDYPLPKVILEYRGLAKLKTTYTDKLPLMINPVSGRVHT
SYHQAVTATGRLSSSDPNLQNIPVRNEEGRRIRQAFIAPEGYRIVAADYSQIELRIMAHL
SQDEGLLKAFAEGKDIHRATASEVFGVPLDKVTGEQRRSAKAINFGLIYGMSAFGLARQL
GIPRGEAQRYMDLYFERYPGVLDYMERTRQQASEQGYVSTLDGRRLYLPDVRSSNAMRRK
AAERAAINAPMQGTAADIIKRAMIEVDAWLQGQEKPLVRAIMQVHDELVFEVHESVIEEA
SQRIRQLMEGSMALAVPLKVDVGVGMNWDEAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattgcagaaaacccactaatcctggttgacggttcctcctacctctaccgc
gcttatcacgccttcccgccgctgaccaactcggcgggcgagccgaccggcgcgatgtac
ggcgtgctgaatatgctgcgcagcctgctgctgcagtatcaaccgagccacgttgccgtg
gtgtttgatgccaaagggaagaccttccgcgatgagctgttcgctgaatacaagtcgcac
cggccgccgatgccggacgatctgcgcgcgcagatcgagccgctgcacaacatggtcaag
gcgatgggtctgccgctgctggtgacacccggcgttgaggcggacgacgttatcggtacg
ctggcgctggaggccgaaaaggccggccatgcggtgctgatcagcaccggcgacaaagac
atggcgcagctggtgacgccgaacgtcaccctgatcaacaccatgaacaacacgatcctc
ggcccgcaggaagtgtgcgacaagtacggcattccgccggagttgatcatcgacttcctg
gcgctgatgggcgattcatcggacaacattcccggcgtaccgggcgtgggcgagaaaacc
gcccaggcgttgctgcaggggatcggcgggctggatgcgctgtacggcaatctggagaac
atcgccacgctgagcttccgcggcgccaaaaccatggcggccaagctggagcagaacaaa
gaggtcgcgtacctctcctataagctggcgacgatcaaaaccgacgtcgaactggatctg
acctgcgcggacctgacggtatctgagccggatgtcgatacgctgcaacagctgttcaaa
cagtacgagttcaaacgctggctggcggacgtggaagctggcgtctggctggaaaacaag
aaaggcgcgggcgcgaaagctgccggcgccgccaaaccggcagccgccgtggaagcgccg
aaagccttggcggaagccaagctgtcccaggacggatatgtcactatcctggatgaagcg
acctttaccgactggctgacgcggctgaaaaaggccgacgtgtttgccttcgataccgaa
accgacggtctggataccctgaccgccaacctgatcggcctgtccttcgcgatcgcgccg
ggcgaagcggcttatttgccggtggcgcacgattacctggatgcgccggcgcagctggat
cgcgcttatgtgctggaggcgctcaagccgctgctggaagacgagaaggcgctcaaggtc
gggcaaaacctgaagttcgatatgagcctgctggcgcgttacggcatcgagatgcgcggc
atcgcctacgacaccatgctggagtcctatgtgctggacagcgtcggcggccgtcatgat
atggacagccttgccgatcgttatctgggccacaaaaccatcaccttcgaagagattgcc
ggcaagggcaaaaaccagctgacgttcaaccagatcgcgctggagcaggcggcgccttac
gccgccgaagacgccgatgtcacgctgcagctgcacctggcgatgtggccgcagctgaaa
cagagcgcggaactgctgacggtattcaatgagattgaaatgccgctgctgccggtgctg
tcgcatatcgaacgcaccggggtgctgatcgatcctgccattttgtcggcccactcccag
gagttggccaagcgtctggcagagttggaggcgcaggcccacgagctggcggaagagccg
ctcaacctggcgtcgaccaagcagctgcaggcgatcctgtacgaaaaacaaaagctgccg
gtgctgaagaaaaccccgggcggggcgccgtccaccaacgaagaggtgctggccgagctg
gcgctggactacccgctgccgaaggtgatcctggaataccgcggcctggcgaagctgaag
accacctataccgacaagctgccgttgatgatcaatccggtcagcggccgggtgcatacc
tcgtaccatcaggcggtgactgccaccggccgcctctcctcgagcgatccgaacctgcag
aatatcccggtgcgcaacgaagaagggcggcgcattcgccaggcctttattgcgccggaa
ggctaccgcatcgttgcggccgactactcgcagatcgagctgcgcatcatggcgcatctg
tcacaggatgaggggctgctgaaggcctttgccgaagggaaagacattcaccgcgccacg
gcgtcggaagttttcggcgtgccgttagataaagtgaccggcgagcagcgccgcagcgcc
aaggcgattaacttcggtttgatttacggcatgagcgccttcggcctggcgcgtcagttg
gggatcccgcgtggggaagcccagcgctatatggatctctactttgagcgttacccgggc
gtgctggattacatggagcgcacccgtcagcaggcttccgagcagggctatgtcagcacg
ctggacggccgccgtctgtatctgccggacgtccgctccagcaacgccatgcgccgcaag
gcggccgagcgcgccgccatcaacgccccgatgcagggcacggcagccgatatcatcaag
cgtgcgatgatcgaggtcgacgcctggctgcaagggcaggagaagccgttggtgcgcgcg
atcatgcaggtgcacgatgaattggtgttcgaggtgcatgaatcggtgatcgaagaagcc
agccagcgcatccgccaactgatggaaggcagcatggccctggcggtgccgctgaaggtc
gatgtgggcgtcggcatgaactgggatgaagcgcactga
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