KEGG   Serratia sp. FS14: L085_04925
Entry
L085_04925        CDS       T03313                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
serf  Serratia sp. FS14
Brite
KEGG Orthology (KO) [BR:serf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:serf02048]
    L085_04925
Enzymes [BR:serf01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     L085_04925
Prokaryotic defense system [BR:serf02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   L085_04925
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII Sigma54_DBD
Other DBs
NCBI-ProteinID: AIA46439
LinkDB
Position
1073676..1076957
AA seq 1093 aa
MSTQHAPKFQEEYSAKLPALALLNNLGWSYLSPEEALATRAGKPDQVVLTHLLREQLAKR
TFTFGGQEYSLSDKAIDNLIAEVNSPALNQGLLTANERLYNHLMYGISVTEFIDGKKANP
TISLIDWHHPTNNSFVFTEEFTVTRANGVESRRPDIVCFVNGIPLVVIEAKRPDGKAKKV
PTIGEGISQTLRNQRHDEIPRLFVYSQLLLSINGHDGRYGTCGTSAKFWAAWREEDLSDA
EMYVIKNQKLLPEQLDKLFDHRPVAARDWYQGLVAAGELAVTGQDKLLISLLLPERLLDM
VRFYTLFDKKVGKVVARYQQVFGIKRLIERINTKRPDGSREGGVIWHTTGSGKSLTMVFL
SKALILHESLKQCRIVVVTDRVDLENQLSRTFISSGELSGKRDKSAAIATSGRRLAEQIG
KGTERIIFSLIQKFNTAIRQPECINTSADIIVLIDEGHRSQGGENHIRMTQALPRAAFVA
FTGTPLLKEDKTTKKFGSIIHAYTMQRATDDKAVTPLLYEERIPDLEVNERALDSWFERI
TEGLSDKQKTDLKRKYASKGQIYTADDRIRLIALDVANHFVKNIDDGLKGQLACDSKAAA
IKYKKYLDEAGLFESAVVISAPDTREGNTDVDESTAPEVVKWWKENVGQQDEQSYTRNVI
DRFDKDDSLKLLIVVDKLLTGFDEPKNAVLYIDKQLKGHNLIQAIARVNRLHPKKKFGLL
IDYRGILKELDTTIEKYQKLASRTQGGYEIDDLAGLYNQMSTEYKRLPQLYKNLWAIFDG
VRNRQDTEQLRQVLVPRIEEKNGELVDVHLKVREDFYEALTEFASCLKVALQSATFFEDK
SFSEDDRRHYKETVKQFSSLRQLVQQDAGERIDYDEYAEQVKKLLDKHVVGVEVREPDGV
YEVNKMGQAQPEEWSEDKTRNETDIIKTRVTRMIEQELRDDPYAQEAFSKLLRQAIEEAE
KLFEHPLKQYMLFREFEEQVQERRLNDIPDAFAGNHHAQAYFGVFKKILPEVFSITDSQV
QDKWIKLAFDVDRSVETSVAENSINPQNIEADIRKKLLPLMFKECKAIGGGMDQAKKIVE
MIVQITRVGLSGV
NT seq 3282 nt   +upstreamnt  +downstreamnt
atgagcactcaacatgccccaaaatttcaggaagaatacagtgctaagcttccggctttg
gcgctgctgaataaccttggctggtcttatctttctcctgaagaggctctggctacccga
gcaggtaaacccgatcaggttgtgttgacgcacctgctcagggagcaactggcaaagcgt
acttttacgtttggtgggcaggaatattccctttctgacaaggctattgataatctgatt
gctgaagtcaacagcccggccctgaatcagggcttactcactgccaatgagcgtctttat
aaccacttgatgtatgggatttccgttaccgagtttattgatggtaaaaaggcgaaccca
accatttccttaatcgattggcatcatccaacgaataacagctttgtctttaccgaggag
ttcacggtaacgcgggctaacggtgttgaatcacgtagaccagatatcgtctgctttgtg
aacggtattccactggtggtcattgaggccaaacgtccggatggtaaagctaaaaaggtg
ccaaccattggtgaagggatatcacaaactctccgcaatcagcggcacgatgaaattcca
cgcctttttgtctacagccagttgctgttgtcgattaatggccatgatggtcggtatggt
acctgtggaacatcggctaaattctgggccgcctggcgtgaagaggacctctctgatgct
gaaatgtatgtcatcaagaaccaaaaacttctgcctgaacagctagataagttatttgat
catcggccagtagcggccagagactggtaccaaggtttggtagctgcgggtgagttggcc
gttaccgggcaagataagctgttaatcagcctattgttgcctgaacgtctgctggatatg
gttcgcttttatacgctgtttgataaaaaagtcggcaaggttgttgctcgctatcagcaa
gtgtttggcatcaaacgcttgattgagcgtatcaataccaaaagacctgatggtagccgt
gaaggtggcgttatttggcataccaccggttcgggtaagtcattgacgatggtatttctg
agcaaagcgctaatcttgcatgaaagcttaaagcaatgccgcattgtggtggttaccgac
cgcgtcgatttggaaaaccagcttagccgcacctttatctccagtggagagctctccggg
aagagagacaagtcagcggcgatcgcgacatctggcaggcgtttggcagagcaaataggt
aagggcactgagcgcattattttctcgttgatacagaaatttaataccgcgatcaggcag
cctgaatgcatcaacaccagcgcagatattatcgtgttgattgatgaaggtcatcgtagc
caaggtggtgaaaaccatatccggatgacgcaggcgttaccgagagccgcattcgtagcc
tttacgggtactccattattgaaagaagataaaacgaccaaaaaatttggttctattatc
catgcttatacgatgcagcgggcaacggatgataaagctgttaccccattgctctacgaa
gagcgcattcctgatttggaagtgaacgaacgtgcacttgatagctggtttgagaggatc
actgaagggttgagtgacaagcaaaaaaccgatcttaagcgcaagtatgccagtaagggc
cagatctacactgcagacgatcgtattcgcctgattgcattagatgttgcgaaccacttt
gtgaaaaatatcgacgatggtttaaaaggtcagcttgcttgcgacagcaaagctgctgcc
atcaagtacaagaaatacctggatgaggccgggctgtttgaatccgcggtggtgatcagc
gcccctgacacacgtgaaggcaacaccgacgttgatgaatctaccgcacctgaagtggtt
aaatggtggaaagagaatgttggacagcaggatgaacaatcctacaccagaaatgtgata
gaccgctttgataaagacgactcgctgaaattgctgatcgtggtagataagctgctaacc
ggctttgatgagcccaagaacgccgtgctttacatagataagcagcttaaagggcacaac
cttatccaggcgatagcacgagttaaccgtttgcaccctaagaagaaattcggtctgctc
atagactatcgtggcattcttaaagagttggatactaccatagagaagtaccagaaactc
gcatcccgcacccagggtggctatgagattgacgatctcgccgggctttataatcagatg
agcaccgaatacaaacgtctaccgcagctctataaaaatctgtgggcaatttttgacggt
gtaaggaacagacaagataccgagcaactgcgccaggtactggtaccacgcattgaagaa
aaaaatggcgaactggttgatgtgcacctgaaagtgcgtgaagacttctacgaggcactg
actgagtttgccagctgtttgaaagttgcattgcaatcagccactttctttgaagacaag
agcttcagtgaagatgaccgccgtcattacaaagagacggtgaagcaattctccagtttg
cgccagttagtgcagcaagatgccggtgagcgtatcgactatgatgagtatgccgagcag
gtcaaaaagttactcgataagcatgttgttggcgtggaggttcgggaacctgatggtgtt
tacgaagtaaacaagatggggcaagcgcagccagaagagtggagcgaagataaaacccgc
aacgaaaccgacatcataaaaacgcgtgttactcgtatgatcgagcaagaactgcgtgat
gatccctatgcgcaggaggcgttctctaagctattacggcaagctattgaagaagccgag
aagttattcgaacatccgctcaagcaatacatgctcttccgtgagtttgaagaacaggtg
caggaacgccgcttgaatgatattccagatgcattcgccggcaaccaccatgctcaggct
tactttggcgtattcaaaaaaattctgcctgaggttttctcgattaccgattcgcaagtt
caggataaatggataaaactggcgtttgatgtggaccgttcagtcgaaacctcggtggct
gaaaactcaataaacccgcagaacattgaagcagatatcaggaaaaagctgctgccattg
atgttcaaagagtgcaaagccattggcggcggaatggaccaggcgaagaagatcgtcgag
atgattgtacaaattacccgtgtcggattgagtggagtataa

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