Serratia sp. FS14: L085_05350
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Entry
L085_05350 CDS
T03313
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
serf
Serratia sp. FS14
Pathway
serf03420
Nucleotide excision repair
serf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
serf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L085_05350 (uvrD)
03430 Mismatch repair
L085_05350 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
serf03400
]
L085_05350 (uvrD)
Enzymes [BR:
serf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L085_05350 (uvrD)
DNA repair and recombination proteins [BR:
serf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L085_05350 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
L085_05350 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
PhoH
Motif
Other DBs
NCBI-ProteinID:
AIA46521
LinkDB
All DBs
Position
1173452..1175614
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AA seq
720 aa
AA seq
DB search
MDVSDLLDSLNEKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV
TFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHLEANLPQDFQILDSDDQL
RLLKRIIKALNVDEKQWPPRQAMWYINGKKDEGLRPQHVETYNNPVEATWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNVLVDEFQDTNSIQYAWIRLLAGGN
SSVMIVGDDDQSIYGWRGAQVENIQRFLKDFPGAETIRLEQNYRSTSNILKAANTLIANN
DGRMGKNLWTEGGEGEPISLYCAFNELDEARFVVNRIKTWQDNGGALNDCAILYRSNAQS
RVLEEALLQTAMPYRIYGGQRFFERQEIKDALAYLRLISNRNDDAAFERVVNTPTRGIGD
RTLDVVRQAARDRQLTLWQATRELMQDKVLAGRAASALQRFIELVESLAHETADMPLHVQ
TDRVIRDSGLFIMYEQEKGEKGQARIENLEELVTATRQFSYQDEDQDLMPLQAFLSHAAL
EAGEGQADAYQDAVQLMTLHSAKGLEFPLVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRASVSRPVNHRRMG
TPISENDTGYKLGQRVRHPKFGEGTIVNLEGSGEHSRLQIAFPGEGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtctccgatctgctcgacagcctgaatgaaaaacaacgtgaagccgtggcggcg
ccgcgcagcaacctgttggttctggccggagcgggcagcggcaagacgcgggtgctggtg
catcgcatcgcctggctgctgtcggtggagaactgctcgccgtattcgatcatggcggtg
accttcaccaacaaggcggcggcggaaatgcgtcaccgaatcgaacatctgatcggcacc
agccagggcggcatgtggatcggcaccttccacggcctggcgcatcgtctgttgcgcgcc
catcacctggaggccaacctgccgcaggatttccagatcctcgacagcgacgaccagctg
cggctgctcaagcgcatcatcaaggcgctgaacgtcgacgagaagcagtggccgccgcgt
caggcgatgtggtacatcaacggcaagaaagacgagggcctgcgcccgcagcacgtcgaa
acctacaacaacccggtggaggccacctggctgcgcatttaccaggcctatcaggaagcc
tgcgatcgcgcggggctggtggatttcgccgagctgctgctgcgcgcgcacgagctgtgg
ctgaacaagccgcatatcctcaatcactaccgcgagcgtttcaccaacgtgctggtggat
gaattccaggataccaacagcatccagtacgcctggatccgcctgctggcgggcggcaac
agcagcgtgatgatcgtcggcgacgatgaccagtcaatctacggttggcgcggcgcgcag
gtggaaaacatccagcgtttcctgaaggatttccccggcgcggaaaccatccgtctggag
cagaactaccgttccaccagcaacattctgaaagcggccaacaccctgatcgccaacaac
gacgggcgcatgggcaaaaacctgtggaccgaaggcggtgaaggcgagccgatatccctc
tactgcgccttcaacgaactcgacgaagcgcgcttcgtggtcaaccgcatcaagacctgg
caagacaacggcggcgcgctgaacgactgcgccatcctgtaccgcagcaacgcccagtcg
cgggtgctggaagaggcgctgttgcagacggcgatgccgtaccgcatctacggcggccag
cgcttcttcgaacgccaggaaatcaaggatgcgctggcttacctgcgcctcatttccaac
cgcaacgacgacgcagccttcgagcgcgtggtcaataccccgacgcgcggcatcggcgat
cgcaccctcgacgtggtgcgccaggcggcgcgcgatcgccagctgacgctgtggcaggcg
acgcgcgagctgatgcaggacaaggtgttggccggccgcgccgcgtcggcgctgcagcgt
ttcatcgaactggtggaatcgctggcgcatgaaaccgccgacatgccgctgcatgtgcag
accgaccgggtgatccgcgactccgggctgttcatcatgtatgaacaggagaagggcgag
aaggggcaggcgcgtatcgaaaacctcgaggaactggtgacggcgacgcgccagttcagc
tatcaggacgaagatcaggatctgatgccgctgcaggcgttcctgtcgcatgcggcgctg
gaagcgggcgaaggccaggccgacgcctatcaggacgcggtgcagctgatgactctgcac
tcggccaaggggctggagttcccgctggtgtttatcgtcggcatggaagagggcatgttc
ccgagccagatgtcgctggatgaaggcggccgtctggaggaggagcgccgtctggcctat
gtgggcgtaacgcgcgccatgcagaagctgacgctgacctatgccgaaacgcgccgtctg
tacggcaaagaggtttaccatcggccgtcgcgctttatcggcgaactgccggaggagtgc
gtggaagaagtgcgcctgcgtgccagtgtatcgcgcccggtcaatcaccgccgcatgggc
acgccgatcagcgagaacgataccggctataagctgggccagcgcgtgcgccatcccaag
tttggcgaaggcaccatcgtcaatctggagggcagcggcgagcacagccggctgcagatc
gccttcccgggtgaaggcatcaaatggctggtggcggcctacgcgcgtttggaaacggtc
taa
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