Serratia sp. FS14: L085_06355
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Entry
L085_06355 CDS
T03313
Name
(GenBank) regulatory protein CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
serf
Serratia sp. FS14
Brite
KEGG Orthology (KO) [BR:
serf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
serf03019
]
L085_06355
Messenger RNA biogenesis [BR:
serf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
L085_06355
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAPES4
Hrs_helical
RH1
Motif
Other DBs
NCBI-ProteinID:
AIA46722
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All DBs
Position
1413335..1415269
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AA seq
644 aa
AA seq
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MRFTTKLSALITLLVALAMFLMLMGCSYSFFYVTQDRQERRLDSLVTTLDQAMLSEPPQE
QEKWLPIVMRTLGIVSIRIEAGTSQLLDYKLPTVKKEHWDALNGYRQVSRPLLQHPGSTL
YITYLDPFASDVRTLQSTAAVTLSIVVMVVILLFSLRWLREQADGEDRLERRARRILNGE
RENVMQGDVREWPANVSGALDRLLADLAEAREERSRVDTLIRAFAAQDAKTGLNNRLFFD
NQLTTQLEDEGSHGIVMMVRLPDFETLRETHGSVAVQELMYSLVNLLSTFVMRYPSALLA
RYFHSDFTVLLPHRTLKEADGIASQLVNAIDALPSTALIDREAFLHIGIVAYRSGQTTEQ
VIDYAEQATRHATLQGENGWYVYDSQVPEKGRGSVKWRTLLEQVLARGGPRLYQKPAVTV
EGEVHHREIMSRIYDGTQELLPAEYMPLVQQLGLAESYDRQQVSRIIPLLAQWPEETLAF
PLCVDSILQRSFQRWLRDTLLQCEKSQRRRILIELAEADVCQHIDRLRPVLRLLSGLGCR
LAVSKAGLTVVSTSYIKSLQVEIVKLHPGLVRSIDKRDENQLFVQSLTGACAGTRAQVFA
ASVRTRNEWQTLKERGILGGQGDFFASPEPIDAGRKKYSRRYRV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgcgatttaccaccaaactctctgcattgatcactctgttggtcgcgctggcgatgttt
ttgatgctgatgggatgctcatacagcttcttttacgttacccaggatcgccaggagcgc
cgcttggattcgctggttaccactctcgatcaagccatgctgagcgagccgccgcaggag
caggagaaatggttgcccatcgtcatgcgcacgctcggcatcgtgtcgatccgcatagag
gccgggaccagccaactgctcgactataaattgccgacggtcaaaaaagagcactgggat
gcgctgaacggctatcgtcaggtctcgcgccccctgttgcagcacccgggcagcacgctg
tacatcacctacctcgatcccttcgccagcgacgtgcgtacgctgcaatccaccgccgcc
gtcacgctgtcgatcgtcgtcatggtggtgattttgctgttcagcctgcgctggctgcgt
gagcaggccgacggcgaagatcgtctggaacgccgcgcgcggcgcattctgaacggcgag
cgtgaaaacgtcatgcagggcgacgtgcgtgagtggccggccaacgtcagcggcgcgctc
gaccgcctgctggccgatctggcggaagcgcgggaagagcgcagccgggtcgatacgctg
atccgcgccttcgccgcgcaggacgccaaaaccgggctgaataatcgcctgttcttcgat
aaccaattgaccactcagctggaagatgaaggctcgcacggcatcgtgatgatggtgcgg
ctgcccgatttcgagaccctgcgcgagacgcacggcagcgtggcggtgcaggagctgatg
tattcgctggtcaacctgctgtctaccttcgtgatgcgctacccgtcggcgctgctggcg
cgctacttccacagcgattttaccgtgttgttgccgcatcgaaccctgaaggaggccgac
ggcatcgcttcacagctggtcaacgccatcgatgccttgccttccacggcgctgatcgat
cgcgaggccttcctgcacatcggcatcgtggcgtaccgcagcggtcaaaccaccgagcag
gtgatcgactatgcggagcaggcgacgcgccacgctacgctgcagggcgaaaacgggtgg
tatgtgtacgacagccaggtgccggaaaaggggcgcggcagcgtcaagtggcgcacgctg
ctggaacaggtgctggcgcgcggtggcccgcggctgtatcagaaaccggcggtgaccgtg
gaaggcgaggtgcaccatcgcgagatcatgagccggatctatgacggcacccaggaattg
ctgccggcggaatatatgccgctggtgcagcagctggggttggcggagagctacgatcgc
caacaggtgagccgcatcattcccttgctggcgcagtggcccgaggaaacgctggcgttt
ccactgtgcgtggactcgattttgcagcgctctttccagcgctggctgcgggatacgctg
ttgcagtgcgaaaaaagtcagcgtcggcgaattctgattgaacttgcggaggcagatgtg
tgtcaacatatcgaccgtttgcgtccggtgctgaggctgttgtcaggtctgggctgccgc
cttgcggtgtccaaagcgggtttaaccgtggtcagtacgtcttatatcaagtcgctgcag
gtggagatcgtcaagctccacccggggttggtgcggagcatcgataagcgggacgaaaac
cagctgttcgtgcagagcctgaccggcgcctgcgcgggcacgcgcgcgcaggtgttcgcc
gccagcgtacgcacgcgcaacgagtggcagacgctgaaagagcgtgggatcctcggcggg
cagggtgactttttcgcgtcgccggaaccgatcgacgcggggcgtaaaaaatattcacgt
cgttatcgcgtttaa
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