Serratia sp. FS14: L085_06565
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Entry
L085_06565 CDS
T03313
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
serf
Serratia sp. FS14
Pathway
serf02020
Two-component system
serf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
serf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L085_06565
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
L085_06565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
serf03021
]
L085_06565
Transcription machinery [BR:
serf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L085_06565
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
AIA46764
LinkDB
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Position
complement(1455858..1457291)
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AA seq
477 aa
AA seq
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MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQEIQLALESNPLLEQTDLHDEIDAKE
TQETEGLDTREALEQKDMPEELPLDATWDEIYTAGTPSGTGTDYSDDELPVYQGETTQTL
QDYLMWQVDLTPFSDTDAAIATSIVDAVDDTGYLTVPLEDILESLGDENVTLEEVEAVLK
RVQRFDPIGVAARDLRDCLLVQLSQYAKDTPYLAEARLIISDHLDLLANHDFRSLMRSTR
LKEDTLKEAMLLIQSLDPRPGQSINTGESEYVIPDVLVRKTQNKWTVELNGDSVPRLKIN
QQYAALGNSARSEADGQFIRSNLQEAKWLIKSLESRNETLLKVTRCIVDQQQAFFEQGEE
FMKPMVLADIAQAVEMHESTISRVTTQKFLHSPRGIFELKYFFSSHVNTDSGGEASSTAI
RALVKKLIAAENPAKPLSDSKLATLLADQGIIVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaactcaggctcagtcaacagctggccatgactcctcagctccag
caggcgatccgcctgctgcagttgtccacgcttgagcttcagcaagagatccagctggcg
ctggagagcaatccgctgcttgaacagaccgatctgcacgacgaaatcgacgccaaagaa
acccaggagaccgaggggctcgatacccgcgaggcgctggaacagaaagacatgccggaa
gagctgccgctggacgccacctgggatgaaatctataccgcgggcacaccgtccggcacc
ggcaccgactacagcgacgacgagctgccggtctatcagggcgagaccacccaaacgctg
caggattacctgatgtggcaggtggatctgacgccgttttccgataccgacgccgccatc
gccacctccatcgtcgacgcggtggacgacaccggctatctcaccgtgccgctggaagac
attctggaaagcctgggcgacgaaaacgtgaccctcgaggaagtcgaggcggtgttgaag
cgcgtgcagcgtttcgatccgatcggcgtcgccgcgcgcgatctgcgcgattgcctgttg
gtgcagctctcccaatacgccaaagacaccccttacctggccgaagcgcggctgatcatc
agcgaccatctggatctgctggccaaccacgactttcgcagcctgatgcgatcaacccgg
ctaaaagaagatacactgaaagaagcgatgctgctgattcagtcgctcgatccgcgcccg
gggcagtcgatcaataccggcgaatcggaatacgtgattccggacgtgctggtgcgcaag
acgcagaacaaatggacggtcgagctcaacggcgacagcgtgccgcgtttgaagatcaat
cagcaatacgccgcgctgggcaacagcgcccgcagcgaagcagacggccagttcatccgc
agcaacctgcaggaagccaagtggctgattaaaagcctggagagccgcaatgagacgctg
ctgaaagtcacccgctgcatcgtcgatcaacagcaggcgttcttcgagcaaggcgaagag
tttatgaaacccatggtgctggcggatatcgcccaggccgtggagatgcatgaatcgacg
atctcgcgcgtcaccacgcagaagtttctgcacagcccgcgcggcattttcgaattgaaa
tatttcttctccagccacgtgaataccgacagcggcggcgaagcctcctcgacggcgatc
cgcgcgttggtgaagaaattgattgcggcggaaaaccccgccaaaccactcagcgacagc
aagctggccaccctgctcgccgatcaggggatcatcgtggcgcggcgcaccgtcgccaag
taccgagagtctttgtccatcccgccgtcgaaccagcgtaaacagttggtttga
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