KEGG   Serratia sp. FS14: L085_06565
Entry
L085_06565        CDS       T03313                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
serf  Serratia sp. FS14
Pathway
serf02020  Two-component system
serf02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:serf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    L085_06565
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    L085_06565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:serf03021]
    L085_06565
Transcription machinery [BR:serf03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     L085_06565
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: AIA46764
LinkDB
Position
complement(1455858..1457291)
AA seq 477 aa
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQEIQLALESNPLLEQTDLHDEIDAKE
TQETEGLDTREALEQKDMPEELPLDATWDEIYTAGTPSGTGTDYSDDELPVYQGETTQTL
QDYLMWQVDLTPFSDTDAAIATSIVDAVDDTGYLTVPLEDILESLGDENVTLEEVEAVLK
RVQRFDPIGVAARDLRDCLLVQLSQYAKDTPYLAEARLIISDHLDLLANHDFRSLMRSTR
LKEDTLKEAMLLIQSLDPRPGQSINTGESEYVIPDVLVRKTQNKWTVELNGDSVPRLKIN
QQYAALGNSARSEADGQFIRSNLQEAKWLIKSLESRNETLLKVTRCIVDQQQAFFEQGEE
FMKPMVLADIAQAVEMHESTISRVTTQKFLHSPRGIFELKYFFSSHVNTDSGGEASSTAI
RALVKKLIAAENPAKPLSDSKLATLLADQGIIVARRTVAKYRESLSIPPSNQRKQLV
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgaagcaaggtttgcaactcaggctcagtcaacagctggccatgactcctcagctccag
caggcgatccgcctgctgcagttgtccacgcttgagcttcagcaagagatccagctggcg
ctggagagcaatccgctgcttgaacagaccgatctgcacgacgaaatcgacgccaaagaa
acccaggagaccgaggggctcgatacccgcgaggcgctggaacagaaagacatgccggaa
gagctgccgctggacgccacctgggatgaaatctataccgcgggcacaccgtccggcacc
ggcaccgactacagcgacgacgagctgccggtctatcagggcgagaccacccaaacgctg
caggattacctgatgtggcaggtggatctgacgccgttttccgataccgacgccgccatc
gccacctccatcgtcgacgcggtggacgacaccggctatctcaccgtgccgctggaagac
attctggaaagcctgggcgacgaaaacgtgaccctcgaggaagtcgaggcggtgttgaag
cgcgtgcagcgtttcgatccgatcggcgtcgccgcgcgcgatctgcgcgattgcctgttg
gtgcagctctcccaatacgccaaagacaccccttacctggccgaagcgcggctgatcatc
agcgaccatctggatctgctggccaaccacgactttcgcagcctgatgcgatcaacccgg
ctaaaagaagatacactgaaagaagcgatgctgctgattcagtcgctcgatccgcgcccg
gggcagtcgatcaataccggcgaatcggaatacgtgattccggacgtgctggtgcgcaag
acgcagaacaaatggacggtcgagctcaacggcgacagcgtgccgcgtttgaagatcaat
cagcaatacgccgcgctgggcaacagcgcccgcagcgaagcagacggccagttcatccgc
agcaacctgcaggaagccaagtggctgattaaaagcctggagagccgcaatgagacgctg
ctgaaagtcacccgctgcatcgtcgatcaacagcaggcgttcttcgagcaaggcgaagag
tttatgaaacccatggtgctggcggatatcgcccaggccgtggagatgcatgaatcgacg
atctcgcgcgtcaccacgcagaagtttctgcacagcccgcgcggcattttcgaattgaaa
tatttcttctccagccacgtgaataccgacagcggcggcgaagcctcctcgacggcgatc
cgcgcgttggtgaagaaattgattgcggcggaaaaccccgccaaaccactcagcgacagc
aagctggccaccctgctcgccgatcaggggatcatcgtggcgcggcgcaccgtcgccaag
taccgagagtctttgtccatcccgccgtcgaaccagcgtaaacagttggtttga

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