Serratia sp. FS14: L085_08025
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Entry
L085_08025 CDS
T03313
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
serf
Serratia sp. FS14
Pathway
serf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
serf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L085_08025 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
serf03019
]
L085_08025 (pcnB)
Enzymes [BR:
serf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
L085_08025 (pcnB)
Messenger RNA biogenesis [BR:
serf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
L085_08025 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
AIA47052
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All DBs
Position
complement(1777433..1778749)
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AA seq
438 aa
AA seq
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MTVIPREQHSISRKDISENALKVLYRLNKSGYEAYLVGGGVRDLLLGKKPKDFDITTNAT
PEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEQNQESDKNSSQQAQNGMLLR
DNIFGSIEEDAQRRDFTINSLYYGVADFTLRDYVGGLNDLKQGVIRLIGDPETRYREDPV
RMLRAVRFAAKLDMRISEETAEPIPRLASLLHEIPPARLFEESLKLLQAGYGFQTYLKLC
EYQLFQPLFPLIARNFTPNHDTPMERILVQVLKNTDHRLQNDMRVNPAFLFAAMLWYPLL
EHAQKLAQESGLAYYDAFALAMNDVLDEQCRSLAIPKRITTLVRDIWQLQLRLSRRQGKR
AHKLMEHPKFRAAYDLLALRAEVEDNQEMLRLAEWWGEFQDATPARQKAMLSTLGDDPAP
RRARQRRPRRRAPRKEGA
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgatcccgcgcgaacagcactcgatctcccgtaaagacatcagcgagaatgcg
ctgaaagtgctttatcgcctgaacaagtccggctacgaggcttatctggtcggcggcggg
gtgcgcgatctgttgctcggcaaaaagccgaaagacttcgacatcaccaccaacgccacg
ccggagcaagtgcgcaagctgttccgcaactgccgcctggtcggccgccgtttccgcctg
gcgcacgtgatgttcgggccggagatcatcgaagtggccaccttccgcggtcaccacgaa
cagaatcaggaatccgacaagaattcctcccagcaggcgcaaaacggcatgctgctgcgc
gacaatatcttcggttcgatcgaggaagacgcccagcgccgtgatttcaccatcaacagc
ctgtactacggcgtggcggatttcaccctgcgcgattacgtcggcggcctgaacgatctg
aagcaaggcgtgatccgcctgatcggcgatccggaaacccgctaccgcgaagatccggtg
cgcatgctgcgcgcggtgcgcttcgccgccaagctggacatgcgcatcagcgaagagacc
gccgagccgatcccgcgtctggcttcgctgctgcatgagatcccaccggcgcgtctgttc
gaagaatccctcaagctgctgcaggcgggttacggtttccagacctacctgaagctgtgc
gaataccagctgttccaaccgctgttcccgctgatcgcccgtaacttcacgccgaaccac
gatacgccgatggagcgcattctggtgcaggtgctgaagaacaccgatcaccgtctgcag
aacgacatgcgcgtcaacccggcgttcctgttcgccgccatgctgtggtacccgctgctg
gagcatgcgcagaagctggcgcaggaaagcggcctggcctactacgacgccttcgcgctg
gcgatgaacgacgtgctcgacgagcagtgccgctcgctggccatcccgaaacgcatcacc
acgctggtgcgcgatatctggcagctgcagctgcgcctgtcccgccgccagggcaaacgc
gcgcacaaactgatggagcatccgaaattccgcgccgcctatgatttgctggcgctgcgt
gcggaagtggaagacaatcaggaaatgttgcgtctggccgagtggtggggcgagttccag
gacgccacgccggcgcggcagaaagccatgttgagcaccctgggtgacgatccggcgccg
cgtcgcgcgcgtcaacgccgtcctcgccgccgggcaccgcgtaaagaaggggcataa
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