Serratia sp. FS14: L085_10325
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Entry
L085_10325 CDS
T03313
Name
(GenBank) 3-methyl-adenine DNA glycosylase II
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
serf
Serratia sp. FS14
Pathway
serf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
serf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L085_10325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
serf03000
]
L085_10325
03400 DNA repair and recombination proteins [BR:
serf03400
]
L085_10325
Enzymes [BR:
serf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
L085_10325
Transcription factors [BR:
serf03000
]
Prokaryotic type
Helix-turn-helix
AraC family
L085_10325
DNA repair and recombination proteins [BR:
serf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
L085_10325
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
AIA47506
LinkDB
All DBs
Position
2282421..2283911
Genome browser
AA seq
496 aa
AA seq
DB search
MQKKPNPSVAMNTQQQALYDALRARDRKFDGRFFVGVSSTGIYCRPVCSARTPKLENCTF
YPSAAAAELAGFRPCLKCRPELAPGLALIDLGNRYAQVAVQLIEQGYLSEHSCGALAARL
GISDRHLRRIFAEQFGASPIDYAQSHRLLQAKRLLADTDLPLSEVAFAAGFGSLRRFNEL
FKARYRLIPSALRSGGARGERATASGLVFHLGYRPPYDWERMLNFLQARAVQGVERVEGR
RYLRSIAVSQGGTEHRGWLSVQPEEARNRVRVEVAPTLSLVTTEVLRRVRLLFDLDAAPD
RINEALGLLAADAPGLRLPGCVNSFEQATRAVLGQLVSVKMAATFAGRMAERWGEVLATP
HEGITHVFPTAERVAQLQPEELRSLGVQVKRAAALIEIARALGEGRLQLDNVLDIEQGIK
ALTALPGIGSWTASYIAMRAWSWPDVFLAGDYLIKQRFPGMTPRQIERYAERWRPWRSYA
TLHLWHNGGWAPEAES
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaaaaccgaacccgagcgttgccatgaatactcaacagcaagcgttgtacgac
gcgctgcgcgcgcgtgaccgcaaattcgacggccgttttttcgtcggcgtctcttccacc
ggcatctattgtcgtccggtgtgcagcgcccgcacgccgaagctggaaaactgcaccttt
tatccgagcgcggcggcggccgaactggcggggtttcgcccctgcctcaaatgccgaccg
gaactggcgcccggcctggcgctgatcgacctgggcaaccgctatgcccaagtggcggtg
cagctcatcgagcagggatatctgtccgaacacagctgcggagcgctggcggcgcggctg
ggcatttccgatcgccatctgcggcgcatcttcgccgaacagtttggcgcctcgccgatc
gattacgcgcagtcgcaccggttgctgcaggccaagcgcctgctggcggacaccgatctg
ccgctcagcgaggtggcgttcgccgccggattcggcagcctgcggcgtttcaatgagctg
ttcaaggcgcgttaccgcctgatcccgtcggcgctgcgcagcggcggcgcgcgcggtgaa
cgggctaccgccagcgggttggtgtttcacctgggctatcggccgccctatgactgggag
cgcatgctgaatttcttgcaggcgcgcgccgtgcagggcgtggagcgggtcgaggggcgc
cgctacctgcgctcgatcgccgtcagccagggcggcacggaacatcgcggctggcttagc
gtgcagccggaagaggcgcgcaatcgggttcgggtcgaggtagcgccgacgctcagtttg
gtaacgacggaggtgttgcgccgggtgcgcttgctgtttgatctggacgccgcgccggat
cgcatcaatgaggcgctgggcttgctggcggccgatgcgccggggctgcgcctgccgggc
tgcgtgaacagtttcgagcaggcgacgcgtgcggtgctggggcagttggtcagcgtgaaa
atggcggcgacctttgccgggcggatggccgaacgctggggcgaagtgctggcgacgccg
catgagggcatcactcacgttttccccacagcagaacgggtggcgcagctgcagcctgaa
gaactgcgctcgctcggggtgcaagtgaagcgcgcggcggcgctgatcgagatcgcccgc
gcgctgggcgaagggcggctgcagctcgacaacgtgctggatatcgaacagggcatcaag
gcgctgaccgcgctgccgggcatcggcagctggaccgccagctatatcgcgatgcgcgcc
tggtcgtggccggacgtgttcctggccggcgactacctgatcaaacagcgtttccccggc
atgacgccgcgccagattgaacgctacgccgagcgctggcgcccgtggcgctcttacgcc
acgctgcatctgtggcacaacggcggctgggcgccggaagcggagagttga
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