Serratia sp. FS14: L085_12780
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Entry
L085_12780 CDS
T03313
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
serf
Serratia sp. FS14
Pathway
serf00362
Benzoate degradation
serf01100
Metabolic pathways
serf01120
Microbial metabolism in diverse environments
serf01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
serf00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
L085_12780
00624 Polycyclic aromatic hydrocarbon degradation
L085_12780
Enzymes [BR:
serf01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
L085_12780
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
DUF4198
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
AIA47989
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Position
2818329..2819066
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AA seq
245 aa
AA seq
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MKSDWMARELVHRDYSHHPPALAPLYKTSVLRSPRNVLISLQNSLSELTAPVFTPTDIGP
LDHDLILNYAKDGLPIGERIIVHGFVRDAFGAPVRNALVEVWQANAGGRYRHKKDQYLAP
IDPNFGGCGRMLTDDNGYYCFRTIKPGPYPWRNQVSDWRPAHIHFSLSGEAFAQRLITQM
YFEGDPLLVRCPILQSVGSDDAMRTLIAELDMHAAVPLDSLAYRFDLVLRGHRATWFENR
TQGAA
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtgattggatggcgcgagaactggtgcatcgcgattacagtcatcacccgccg
gcgctggcgccgctgtataaaaccagcgtgctgcggtcgccgcgcaatgtattaatttca
ttgcaaaactcgctgtctgaactgaccgcccccgtcttcacgccaacggatatcggcccg
ctggatcacgatctgattctgaattacgccaaagacggcttaccgatcggcgagcggatc
atcgtgcatggatttgtgcgggatgccttcggggcgccggtgcgcaacgctctggtcgag
gtatggcaggccaatgcgggagggcgctatcgtcacaagaaagatcagtatctggcgcct
atcgatcccaactttggtggctgcggcaggatgctgaccgacgacaacgggtattactgt
tttcgtaccatcaagccgggcccgtatccctggcgcaatcaggtcagcgactggcgtccg
gcgcatattcacttctcgctctccggcgaggcgttcgcgcagcgcttgatcacgcagatg
tatttcgaaggcgatccgttgctcgttcgctgccccatcttgcagtcggtaggcagtgac
gatgcgatgcgcacgctgattgccgagctggatatgcacgccgccgtgccgctggacagt
ctggcttaccgcttcgatctggtgctgcggggccatcgagccacgtggtttgagaaccgt
acacagggagccgcgtga
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