Serratia sp. FS14: L085_14710
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Entry
L085_14710 CDS
T03313
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
serf
Serratia sp. FS14
Brite
KEGG Orthology (KO) [BR:
serf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
serf03009
]
L085_14710
Enzymes [BR:
serf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
L085_14710
Ribosome biogenesis [BR:
serf03009
]
Prokaryotic type
rRNA helicases
L085_14710
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AIA48363
LinkDB
All DBs
Position
3234039..3235421
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AA seq
460 aa
AA seq
DB search
MSTVSFSSLPLPAEQLANLNELGYAKMTPVQAAALPAILQGRDVRAKAKTGSGKTAAFGI
GLLNNIVVTQVATQALVLCPTRELADQVSKELRRLARFTQNIKILTLCGGQPMGPQLDSL
VHAPHIVVGTPGRIQEHLRKKTLLLDELKVLVLDEADRMLDMGFADDIDDVISYTPPQRQ
TLLFSATYPAGIERISERVQRQPLSVEVDDDEAQTAIEQRFYETTREQRPALLVSAIRYH
QPASCVVFCNTKRDCQTVLEALEARGISALALHGDLEQRDRDQVLVRFANRSCRVLVATD
VAARGLDIKELELVVNYELAFDPEVHVHRIGRTGRAGMSGLAISLCTPQEMARAHAIEDY
LQMTVDWAPVSELSGAANGSLEAEMVTLCIDGGRKAKIRPGDILGALTGDAGLTAAEVGK
IDMFPVHAYVAIRKASARKALQQLQQGKIKGKSCKVRLLK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacagtttctttttcttccctgcctctgccagccgaacagttggccaacctcaac
gaactggggtacgccaaaatgacgccggtgcaggccgccgcgttgcccgctatcctgcaa
gggcgagacgtgcgcgccaaggcgaaaaccggcagcggcaaaacggcggcattcggcatt
ggcttgctgaataacatcgtcgttactcaggttgccacgcaggcgctggtgctctgcccc
actcgcgagttggccgatcaggtgagcaaagagctgcgtcgcctggcgcgtttcacgcaa
aacatcaaaattctgacgctgtgcggtggccaaccgatggggccgcagctcgactcgctg
gtgcacgcgccacacatcgtggtggggacgccggggcgcattcaggagcatctgcgcaag
aaaacgctgctgctggacgagctgaaggtgttggtgctggatgaggccgaccgcatgttg
gatatgggtttcgccgacgatatcgacgatgtgatcagctacacgccgccgcagcgtcag
acgctgttgttttccgccacttatccggcgggcatcgaacgcatcagcgagcgtgttcag
cgtcagccgctgagcgtcgaagtggacgatgacgaagcgcagaccgctatcgaacaacgc
ttttatgagactacgcgcgagcagcgtccggcgctcctggtgtcggccattcgctaccat
caacccgcgtcctgcgtggtgttctgcaataccaagcgcgattgtcagacagtgcttgag
gccctggaggcccgcggcatcagcgcgctggcgctgcatggcgatctggagcagcgcgac
cgcgatcaggtgttggtgcgcttcgccaatcgcagttgccgagtgttggtggcgaccgac
gtcgccgctcgcgggctggacatcaaagagctggagctggtggttaactacgaactggcg
ttcgatcccgaagtgcatgtgcaccgtatcggccgcaccggccgcgccggcatgagcggg
ctggcgatcagcctgtgcacgccgcaggagatggcgcgggcgcatgcgattgaagactac
ctgcagatgaccgtcgattgggcgccggtgtccgagctgagcggggcggccaacggctcg
ctggaggcagagatggtgacgctgtgcatcgacggcggccgcaaggccaagatccgtccc
ggcgatatccttggcgcgctgaccggcgatgccgggctgacggcggcggaagtgggcaag
atcgacatgttcccggtgcatgcctacgtcgcgatccgtaaagccagcgcgcgcaaggcg
ctgcaacagctgcaacagggcaaaatcaaaggcaagagctgcaaggtgcggctgctgaaa
taa
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