KEGG   Serratia sp. FS14: L085_17165
Entry
L085_17165        CDS       T03313                                 
Name
(GenBank) RNA polymerase, sigma 19 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
serf  Serratia sp. FS14
Pathway
serf02020  Two-component system
Brite
KEGG Orthology (KO) [BR:serf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    L085_17165
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:serf03021]
    L085_17165
Transcription machinery [BR:serf03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     L085_17165
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_ECF PhyR_sigma-like Sigma70_r4 HTH_23 HTH_7 HTH_Tnp_4 HTH_24 HTH_IclR HTH_28 HTH_36 DUF722 HTH_31 TnsD DUF1118 Rv2175c_wHTH HTH_11 DUF3080 Phage_terminase HAC6_helical
Other DBs
NCBI-ProteinID: AIA48850
LinkDB
Position
3764115..3764639
AA seq 174 aa
MSATASAPHAALSRLYATHHAWLQGWLRRRLGCAFDADDVAQDTFMRLLKSDAAATLREP
KDFLVTVAKRVMVDLFRRRTLERAYLEMLALIPEGHAPSPEQRQSLLDSLQQIDAMLDGL
GPKVKQAFLLSQLEGLGYTDIAARLGVSVSSVKKYMAKATEHCLLFSLENDVFS
NT seq 525 nt   +upstreamnt  +downstreamnt
atgtccgccaccgcctctgccccgcacgccgcgctgtcgcgcctttacgccacccaccac
gcctggttgcagggatggttgcgtcggcggctgggctgcgcgttcgatgcggacgatgtg
gcgcaggacacctttatgcgcctgctgaaaagcgacgccgcggcaaccctgcgcgaaccg
aaagactttttggtcaccgtcgccaaacgggtgatggtcgatctgttccgccgcagaacg
ctggagcgcgcctatctggagatgctggcgctgatcccggaaggccatgccccgtcgccg
gagcagcgccagagcctgctggacagcctgcagcagatcgacgccatgctcgacggcctc
gggccgaaggtaaaacaggcctttctgttgtcgcagctcgaaggcctgggctatacggac
atcgccgcgcgcctcggtgtctcggtcagctcagttaaaaaatacatggccaaagccacc
gaacattgcctgctgttcagcctggaaaacgacgttttctcatga

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