Serratia sp. FS14: L085_17165
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Entry
L085_17165 CDS
T03313
Name
(GenBank) RNA polymerase, sigma 19 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
serf
Serratia sp. FS14
Pathway
serf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
serf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L085_17165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
serf03021
]
L085_17165
Transcription machinery [BR:
serf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L085_17165
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
PhyR_sigma-like
Sigma70_r4
HTH_23
HTH_7
HTH_Tnp_4
HTH_24
HTH_IclR
HTH_28
HTH_36
DUF722
HTH_31
TnsD
DUF1118
Rv2175c_wHTH
HTH_11
DUF3080
Phage_terminase
HAC6_helical
Motif
Other DBs
NCBI-ProteinID:
AIA48850
LinkDB
All DBs
Position
3764115..3764639
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AA seq
174 aa
AA seq
DB search
MSATASAPHAALSRLYATHHAWLQGWLRRRLGCAFDADDVAQDTFMRLLKSDAAATLREP
KDFLVTVAKRVMVDLFRRRTLERAYLEMLALIPEGHAPSPEQRQSLLDSLQQIDAMLDGL
GPKVKQAFLLSQLEGLGYTDIAARLGVSVSSVKKYMAKATEHCLLFSLENDVFS
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccaccgcctctgccccgcacgccgcgctgtcgcgcctttacgccacccaccac
gcctggttgcagggatggttgcgtcggcggctgggctgcgcgttcgatgcggacgatgtg
gcgcaggacacctttatgcgcctgctgaaaagcgacgccgcggcaaccctgcgcgaaccg
aaagactttttggtcaccgtcgccaaacgggtgatggtcgatctgttccgccgcagaacg
ctggagcgcgcctatctggagatgctggcgctgatcccggaaggccatgccccgtcgccg
gagcagcgccagagcctgctggacagcctgcagcagatcgacgccatgctcgacggcctc
gggccgaaggtaaaacaggcctttctgttgtcgcagctcgaaggcctgggctatacggac
atcgccgcgcgcctcggtgtctcggtcagctcagttaaaaaatacatggccaaagccacc
gaacattgcctgctgttcagcctggaaaacgacgttttctcatga
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