Serratia sp. FS14: L085_21505
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Entry
L085_21505 CDS
T03313
Name
(GenBank) urea carboxylase
KO
K01941
urea carboxylase [EC:
6.3.4.6
]
Organism
serf
Serratia sp. FS14
Pathway
serf00220
Arginine biosynthesis
serf00791
Atrazine degradation
serf01100
Metabolic pathways
serf01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
serf00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
L085_21505
09111 Xenobiotics biodegradation and metabolism
00791 Atrazine degradation
L085_21505
Enzymes [BR:
serf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.6 urea carboxylase
L085_21505
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Gene cluster
GFIT
Motif
Pfam:
CT_A_B
CPSase_L_D2
Biotin_carb_N
CT_C_D
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp_5
ATP-grasp
RimK
NQRA_N
RnfC_N
PTS_EIIA_1
Motif
Other DBs
NCBI-ProteinID:
AIA49700
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All DBs
Position
complement(4667425..4671045)
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AA seq
1206 aa
AA seq
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MFTTVLIANRGEIACRAIRTLKRLGVTSVAVYSDADRNAPHVTEADRAVALGGDKAADSY
LRIDKILAAAAATGAQAIYPGYGFLSESAEFADACEAAGIAFIGPTAAQMREFGLKHRAR
ELAALAGVPMTPGTGLLESVEQAVAAAARIGYPVMLKSTAGGGGIGLTRCDDEAALRDAY
DSVKRLGEQFFRDAGAFIERFVDRARHVEVQIFGDGQGQVAALGERDCSLQRRNQKVVEE
TPAPHLPAATRQALHRAAVALGESVNYRSAGTVEFIYDAARDEFYFLEVNTRLQVEHPVT
EMVTGLDLIACMLQVAAGDALDWAALRRAPQGAAIEVRLYAEDPLKNFQPSPGVLTEVHF
PDDVRLDGWVATGSEVSAFYDPMIAKLIVHGADRAQALEKLRVALAATRLHGIATNLDYL
RQVIATPQFQRGDVWTRLLDDLRFQPHCLEVLQPGTYSSVQDYPGRLGYWDIGVPPSGPM
DDFAFRLANRIVGNHPAAAGLEFTLQGPTLRFHCDATIALTGASCPADLDGEAVAYWRPI
TVRAGQVLTLGRATHGCRTYLAVRNGFDVPVYLGSRSTFALGQFGGHAGRTLRVADMLAI
AQPALAASTTPAPIAAPQAMDDSLIPHYGDQWHIGVLYGPHGAPDFFTAESIEAFFATDW
QVHYNSNRLGVRLAGPKPEWAREDGGEAGLHPSNVHDCEYAIGAINFTGDFPVILTRDGP
SLGGFVCPVTIAKAELWKVGQVKPGDRIRFHPIGFRQAQSLEQAQLGSIEALAAVKAITL
PPPDLAPAETVSAAVLAALPAAEGRPAVAYRQAGDGYILMEYGDNVLDLALRLRIHLLMQ
SLREEAIPGVAELAPGVRSLQIRYDSRQISQADLLQRLLARERALGDVSRLKVPTRTVWL
PMAFEDSATLGAVDRYQQTVRASAPWLPNNVDFIQRINGLSRREQVRDILFDASYLILGL
GDVYLGAPCAVPLDPRHRLLSSKYNPARTHTAEGTVGIGGMYMCIYGMDSPGGYQLVGRT
LPIWNKFLKNPQFTAGEPWLLRFFDQVRFYPVSEQELDEQREAFREGRMQVRIEESEFDF
AAYTRFLADNAGAIADFQHRQQQAFSAEVARWRSDDDEAEAQLLPPEEEDAIDGDLVSAD
LNGSVWKILVEPGQAVAAGQPLIVVEAMKMELAVTAPRAGIVKRISCRQGRPVGPGDALL
WLEKAV
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgtttactaccgtactgatcgctaaccgcggcgaaatcgcctgccgcgccattcgcacc
ctgaaacgcctgggcgtaaccagcgtggcggtctactccgacgccgaccgcaatgcgccg
cacgtcaccgaggccgacagggcggtggcgctcggcggcgacaaggccgccgacagctac
ctgcgcatcgacaagatcctcgcggcggcagcggccaccggcgcgcaggcgatctacccc
ggctacggctttttgtccgagagcgccgagtttgccgacgcctgcgaagcggcgggcatc
gcctttatcggcccgacggcggcgcagatgcgcgagttcggcctcaagcaccgggcgcgc
gagctggcggcgttggccggggtgccgatgacgccgggcaccggcttgctggagagcgtt
gagcaggcggtcgccgccgctgcgcgcatcggctacccggtgatgctgaaaagcaccgcc
ggcggcggcggcatcggcctgacgcgctgtgacgacgaggcggcgctgcgcgacgcgtac
gacagcgtcaaacggctgggggagcagttcttccgcgacgccggcgcctttatcgaacgc
ttcgtcgatcgggcgcgccacgtcgaggtgcagattttcggcgatggccaggggcaggtg
gcggcgctcggcgagcgcgactgttcactgcagcgccgcaaccaaaaggtggtggaggaa
accccggcgccgcatctgccggcggcgacccgccaggcgctgcatcgggcggcggtggcg
ctgggcgagtcggtgaattaccgcagcgccggcacggtggagttcatttacgacgccgcg
cgcgacgagttttatttcctggaagtgaacacccgcttacaggtagagcacccggttacc
gagatggtcaccggcctggatctgatcgcatgcatgctgcaggtggcggcgggcgacgcg
ttggattgggcagcgttgcgccgcgcgccgcagggcgcggcgatcgaggtgcgcctctac
gccgaagatccgctgaaaaacttccagcccagccccggcgtgttgaccgaggtgcatttc
cctgacgacgtgcgcctcgacggctgggtggcgaccggcagcgaagtttcggcgttttac
gacccgatgatcgccaagctgatcgtacacggcgcggatcgggcgcaggcgctggaaaaa
ctgcgcgtggcgctggcggcgacccgtttgcacggcatcgccaccaacctcgactatctg
cggcaggtgatcgccacgccgcaatttcagcgcggcgacgtctggacgcgcctgctggac
gatttgcgtttccagccgcactgcctcgaagtgctgcaacccggcacctacagcagcgtg
caggattatcccggccgcctcggctattgggacatcggcgtgccgccgtccggcccgatg
gacgacttcgcgtttcggctggccaaccgcatcgtcggcaaccacccggcggcggccggg
ctggagtttaccctgcaggggccgacgctgcgctttcactgcgacgccaccatcgcgctg
acgggcgccagctgcccggccgatctggacggcgaggcggttgcgtattggcggccgatt
acggtgcgggccgggcaggtgctgacgctggggcgcgctacgcacggctgccgtacctat
ctggcggtgcgtaacggcttcgacgtgccggtatatctcggcagccgctctaccttcgcg
ctcgggcagttcggcggccacgccgggcgcaccttgcgcgtggcggacatgctggcgatc
gcccaaccggcgctggcggccagcaccaccccggcgccgatcgccgcgccgcaggcgatg
gacgacagcctgatcccgcactacggcgatcaatggcacatcggcgtgctgtacgggccg
cacggcgcgccggactttttcaccgctgaatcgatagaggccttcttcgccaccgactgg
caggtgcattacaactccaaccgcctcggcgtgcgcctggcggggccgaagcccgagtgg
gcgcgggaggacggcggcgaagccggtttgcacccttccaacgtgcacgactgcgagtac
gccatcggcgcgatcaacttcaccggcgacttcccggtgatcctgacccgcgatgggccg
agcctcggcggcttcgtctgcccggtgaccattgccaaggccgaactgtggaaagtgggg
caggtgaagccgggcgaccgcatccgtttccatccgatcggcttccggcaggcgcagtcg
ctggagcaggcgcagcttggcagcatcgaagcgctggcggcggtgaaggccatcaccctg
ccgccgccggatctggccccggcggagaccgtttccgccgcggtgctggcagcgctgccg
gcggcggaggggcgcccggcggtggcgtatcgccaggcgggggacggctacatcctgatg
gagtacggcgacaacgtgctcgatctggcgctgcggctgcgcattcatctgctgatgcag
tcgctgcgtgaggaggcgataccgggcgtggcggagctggctccgggcgtgcgttcgctg
cagatccgctacgatagtcggcagattagccaggccgacctgctgcagcgcctgctggcg
cgcgaacgggcgctgggggacgtcagccgcctgaaggtgccgacgcgcaccgtgtggctg
ccgatggcgtttgaggattcggccacgctgggggcggtggatcgctatcaacagacggtg
cgcgcctcggcgccctggctgccgaacaacgtcgatttcattcagcgcatcaacggcctg
agccgacgcgagcaggtgcgcgacattctgttcgacgccagctacctgatcctcgggctg
ggggacgtgtacctcggtgcgccctgcgcggtgccgctcgatccgcgccatcgcctgctg
agctccaaatacaacccggcgcgcacccacaccgccgaagggacggttggcatcggcggc
atgtacatgtgcatctacggcatggattcgccgggcggttaccagctggtggggcgcacg
ctgccgatctggaacaaattcctcaaaaacccgcagttcaccgccggtgaaccctggctg
ctgcgctttttcgatcaggtgcgcttctacccggtcagcgagcaagagttggacgagcag
cgcgaagcgttccgcgaagggcgcatgcaggtgcgaatcgaagagagcgagttcgacttc
gccgcctacacccgtttcctggccgacaacgccggggcgatcgccgatttccagcatcgt
cagcagcaggcgttcagcgccgaagtggcgcgctggcgcagcgatgacgacgaggccgag
gcgcagctgttgccgccggaggaagaagacgccatcgacggcgatctggtcagcgccgat
ctgaacggcagcgtgtggaagatcctggtggaaccggggcaggcggtggcggccgggcag
ccgctgatcgtggtcgaggcgatgaaaatggagctggcggtcaccgcgccgcgcgccggg
atcgttaagcgcatcagctgccggcaggggcggccggtcgggccgggcgacgccctgctg
tggctggaaaaggcggtctga
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