Serratia sp. FS14: L085_23575
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Entry
L085_23575 CDS
T03313
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
serf
Serratia sp. FS14
Brite
KEGG Orthology (KO) [BR:
serf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
serf03400
]
L085_23575
DNA repair and recombination proteins [BR:
serf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L085_23575
Archaeal homologous recombinant proteins
L085_23575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
cobW
Gmx_para_CXXCG
nSTAND3
AAA_21
TsaE
NTPase_1
AAA_22
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
AIA50112
LinkDB
All DBs
Position
5118648..5121899
Genome browser
AA seq
1083 aa
AA seq
DB search
MKILSLRLKNLNSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LNVTPSQNELMTRHTAESLAEVEFEVKGVGYRAFWSQRRAKNAPDGNLQAPKVELARRED
GKILADKVRDKLELTAAITGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTEI
YGRLSEQVFESHKQAKTDLDALHQRASGIELLNDEQRQSLTEQLAALSAQEIALGEQTQR
QQQALSWLQQWQRLRQQQSEGQLRLDTAQREQEEAAPQLQRLALSEPAEKLRPLRGERDR
CRAELQTIQQQAAQLTQQQEQQSAQLTPLQQAVEKTRQAQQAHAEHMRQQQQQIDEQVAP
LDHQIAQLQSTQAERRQAGDAAAQQCAQQQTALEQLTAQRSQLTRQAAQHQQQLNALSEA
LAVQQQQQQALEAQKPLAPLRQRLSVLADLRPTRQQLFTLSSLSQQIVKRLEQQRQELNS
GQHELTQLEPQLELIRQQFKQQKAHQADVEKTYALEQRIVGLEAERARLQPGAPCPLCGS
CEHPAVEQYQEVKLSETAQRLEQMKVQTEALQKQGVELRARYDNLQQQLQRQQQTIAQDE
QQLAGQQQQWRQLSAPLAFDFTLADGEQLSAWLSGCDDEERRGQQALQQHEQAAQAVQQA
KDALIALQTQQQQTQQQLALLEERFTLLQKAHADSLQQQQELQQRWQEGEKTLAERRAQR
LTLFGEQQVAEVREQLRAKQTACEQASLQAAEQWQKAQELRERLAGQQSGLQQQHTQMQE
RLQQAQQQWQQALADSEFADETAFAAALLDDVLRRELQQRKEQLQQRQVEAAALLTQATQ
TLEQHRQNRPEGLDEANADLDALTQSLAELAQQLKALQLRQGELRNQLASDAERRLNQQA
LFEQIARSQQDYDDWSYLNQLIGSKEGDKFRRFAQGLTLDHLVYLANLQLGRLHGRYLLQ
RKTSDALELQVVDTWQADALRDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEG
FGTLDAETLDTALDALDSLNASGKTIGVISHVEAMKERIPVQIKVKKVNGLGVSRLEAHF
RLE
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcagcctgcggttaaaaaacctcaactcgctgcagggcgaatggaaaatt
gacttcaccgccgagccgttcgccagcaacggcctgttcgccattaccggcccgaccggc
gcgggcaaaactaccctgctggacgccatctgcctggcgctgtaccaccagacgccgcgt
ctcaacgtcacgccaagccagaatgaactgatgacccgccacaccgccgaatcgctggcg
gaggtcgaattcgaggtcaagggcgtcggctatcgcgccttctggagccagcgccgcgcc
aaaaacgcgccggacggcaatctgcaggcgccgaaggtcgaactggcacgccgcgaagac
ggcaagatcctggcggacaaggtgcgcgacaagctggagcttaccgccgccatcaccggg
ctggactttggccgcttcaccaaatcgatgatgctgtctcaggggcagttcgccgccttc
ctcaacgccgacgccaacgatcgcgccgagctgctggaagagctgaccggcaccgaaatc
tacgggcggttgtccgaacaggtgttcgagtcgcacaagcaggccaaaaccgacctggat
gcgttgcaccaacgcgccagcggcatcgaactgctgaacgacgagcagcgccagtctctg
accgaacagctggcggcgctgagcgcgcaggaaatcgctctcggcgaacaaacccagcga
cagcaacaggcgctgagctggctgcagcaatggcaacgcctccggcaacagcaaagcgag
gggcaattgcggctggacaccgcccagcgcgagcaggaggaggccgccccgcagctgcag
cggctggcgctcagcgagccggccgagaaattgcggccgctgcgcggtgaacgcgatcgc
tgccgcgccgagctgcagacgatacaacagcaggcagcccagctgacgcaacagcaggaa
cagcagtcggcgcagttgaccccgctgcagcaggcggtggaaaaaacccgccaggcgcag
caagcgcatgccgaacacatgcggcaacagcaacaacagatcgacgagcaggtcgccccg
ctcgaccatcaaatagcccaactgcagtcgacacaggccgagcggcgacaggccggcgat
gccgccgcacagcagtgcgcccagcagcagaccgcgctggagcagctcactgctcagcgc
agccaactgacgaggcaggccgcacagcatcagcagcagttgaatgcgctgagtgaagcg
ctggccgttcaacagcaacagcagcaggcgctggaggcgcaaaagccgctggccccgctg
cgccagcgcctgagcgtcctggcggatctgcgcccgacgcgccagcagctgtttactcta
tcctctttatcgcagcaaatcgttaaacggctggaacaacagcggcaagagctaaacagc
ggtcaacatgaacttacccagttggaaccacagctagaactcatccgtcagcaatttaag
cagcagaaagcccaccaggccgatgttgaaaaaacctatgcgctggaacaacggatcgtg
ggtctggaggccgagcgcgcccgtttgcaacccggcgccccctgcccgctgtgcggctca
tgcgagcacccggcggtagaacaataccaagaggtaaaactgtcagaaaccgcgcaacgt
ctggagcaaatgaaagtccagaccgaagcattgcaaaaacaaggcgtcgagctgcgagcc
cgttacgacaacctgcaacagcaattgcagcgtcagcagcaaaccatcgcgcaggatgaa
caacagctggccggccaacagcagcagtggcggcagctcagcgcgccgctggcgttcgac
tttacgctggcggatggcgagcaactcagcgcctggctgagtggctgcgacgacgaagaa
cggcgcgggcaacaggcgctgcagcagcatgaacaggcggcgcaggcggtacagcaggcg
aaagacgcgctcatcgctctgcaaacgcagcagcagcagacgcagcaacagctggcgttg
ctcgaagaacgctttacgctgctgcagaaagcccacgccgacagcctgcaacagcagcaa
gagctgcaacaacgctggcaagaaggcgagaagacccttgccgaacgacgcgcgcagcgg
ctgacgctgttcggcgaacagcaggtcgccgaggtgcgcgaacagctgcgcgccaaacaa
accgcctgtgaacaggccagtttgcaggccgccgagcagtggcaaaaggcgcaggaactg
cgcgagcgcctggccggccagcagtccgggctgcaacaacaacacacccagatgcaggag
cggctgcagcaggcgcagcagcagtggcagcaggcgctggccgacagcgaattcgccgat
gaaaccgccttcgccgccgcgctgctggacgatgtcctgcgccgcgaattgcagcagcgc
aaagaacagctgcaacagaggcaggtggaggccgccgccctgctgacacaggcgacgcaa
acgctggagcagcaccggcagaaccgccctgaagggctggatgaagccaacgcggatctc
gatgcgctcacccaatcgctggccgagctggcgcagcagttgaaggcgctgcagctgcgc
cagggcgaactgcgcaaccagctggcaagcgacgccgaacgccgtctcaatcagcaggcg
ctgttcgagcagatcgcccgcagccaacaagactacgatgactggagctacctcaaccag
ctgatcggctcgaaagaaggcgacaagttccgccgcttcgctcaggggctgacgctcgat
catctggtgtatctggccaaccttcagctcggccggctgcacgggcgctacctactgcag
cgcaagaccagcgacgctctggaactgcaggtggtcgacacctggcaggcggacgcgctg
cgcgatacccgcaccctgtccggcggcgagagcttcctggtcagcctggcgctggcgctg
gcgttgtccgatctggtcagccataaaaccagcatcgactcgctgttcctcgacgaaggt
ttcggcacgctggatgccgaaaccctcgataccgcgctggacgcgctggacagtctgaac
gcctccggcaaaaccattggcgtgatcagccacgtcgaggcgatgaaagaacgcattccg
gtgcagatcaaggtgaaaaaggtcaacgggcttggcgtcagccggctggaggcgcacttc
aggctggaatga
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integrated database retrieval system
