Serratia sp. HRI: GF111_04120
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Entry
GF111_04120 CDS
T10951
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
serh Serratia sp. HRI
Brite
KEGG Orthology (KO) [BR:
serh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
serh03009
]
GF111_04120 (rlmC)
Enzymes [BR:
serh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
GF111_04120 (rlmC)
Ribosome biogenesis [BR:
serh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GF111_04120 (rlmC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
Methyltransf_15
Methyltransf_12
Methyltransf_11
Methyltransf_ANTKMT
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
UBI65083
LinkDB
All DBs
Position
complement(843419..844549)
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AA seq
376 aa
AA seq
DB search
MHCALYTAGTCRSCQWLEKPYPQQLADKQHHLQSLLAGRDVAQWLQPVAGELSAFRNKAK
MVVSGSVERPLLGMLHRDGMPVDLSDCPLYPAGFAPMFAVLKSFIARAGLTPYNVARKRG
ELKYLLLTESTLDDGVMLRFVLRSETKLAQLRAALPWLQQQLPQLKVISANIQPVHMAIM
EGEREIALTEQQALEERFNQVPLFIRPQSFFQTNPQVAADLYATARDWVRALGIDSMWDL
FCGVGGFGLHCAQPQTRLTGIEISAEAIACARQSAQRLGLLHVDFQALDSTRFATAEGQV
PQLVLVNPPRRGIGQALCDYLSLMAPDYILYSSCNAESMAKDIEMLPGYRIERVQLFDMF
PHTAHYEVLTLLVRIL
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcgctttgtatacggcgggcacctgccgttcctgtcagtggctggaaaagccc
tatccgcagcaactggccgacaaacagcatcacctgcaatcgttgctggccggacgcgac
gtcgcgcagtggctgcagccggtggcgggagagctgagcgcatttcgcaataaagccaag
atggtggtcagcggcagcgtggagcgcccgctgctcggcatgctgcaccgcgacggcatg
ccggtcgatctgagcgactgcccgctgtatcccgccggctttgcgccgatgtttgcggtg
ctgaaaagctttatcgcccgcgcgggcctgacgccgtataacgtggcgcgcaaacgcggc
gagctgaagtacctgctgctgaccgaaagcacgctcgacgacggcgtgatgctgcgcttc
gtgctgcgttcggaaaccaagctggcacagctgcgcgccgcgctgccgtggctgcagcag
cagctgccgcagctcaaggtgatctccgccaatattcagccggtgcacatggcgatcatg
gaaggggagcgcgagatcgcgctgaccgaacagcaggcgctggaggagcggttcaatcag
gtgccgctgtttatccgcccgcaaagcttcttccagaccaacccgcaggtggccgccgat
ctgtatgccaccgcccgcgactgggtgcgcgcgctgggtatcgacagcatgtgggatctg
ttctgcggcgtcggcggtttcggcctgcactgcgcgcaaccgcaaacgcggctgaccggc
atcgaaatcagcgcggaagcgatcgcctgcgcccgccagtcggcacagcggttagggctg
ctgcacgtagattttcaggcgctcgattccacccgcttcgccaccgccgaaggtcaggtg
ccgcagctggtgctggtcaacccgccgcgccgcggcatcggccaggcgctgtgcgactac
ctgagcctgatggcgccggactatattctctattccagctgcaacgccgagagtatggcg
aaagatatcgagatgttgccggggtaccgcatcgaacgggtgcagctgttcgacatgttc
ccgcataccgcgcactacgaggtgctgacgctgttggtgcggattttataa
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