Serratia sp. MYb239: CLM71_07625
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Entry
CLM71_07625 CDS
T05477
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
serm
Serratia sp. MYb239
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
serm03009
]
CLM71_07625
Enzymes [BR:
serm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
CLM71_07625
Ribosome biogenesis [BR:
serm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CLM71_07625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
Methyltransf_12
Methyltransf_11
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
AVJ17011
LinkDB
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Position
1604616..1605746
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AA seq
376 aa
AA seq
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MHCALYTAGSCRSCQWLEKPYPQQLADKQQHLQALLSEREVGQWLTPVAGALSAFRNKAK
MVVSGSVERPLLGMLHRDGTPVDLCACPLYPASFAPMFNVLKTFIARAGLTPYNVARKRG
ELKYLLLTESTGNGGVMLRFVLRSESKLAQLRAVLPWLQQQLPQLRVISVNIQPVHMAIM
EGDREIILTEQQALEECFNQVPLYIRPQGFFQTNPQVAASLYATARDWVRELGIDSMWDL
FCGVGGFGLHCAQPETRLTGIEISAEAIRCARQSAATLGLQRVDFQALDSTRFATAEGDV
PQLVVVNPPRRGIGKELCDYLQRMAPDYLLYSSCNAQSMAQDMAQLPGYRVERVQLFDMF
PHTAHYEVLTLLVREK
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcgcgttgtatacggccggcagttgccgttcctgtcagtggctggaaaagcct
tatccgcagcagctggctgataaacagcagcatctgcaggccctgctgtccgaacgcgaa
gtcgggcagtggctgacgccggttgccggcgcgctgagcgcattccgcaataaggcgaaa
atggtggtcagcggcagcgtggagcgcccgctgctggggatgttgcaccgcgacggtacg
ccggtcgatctgtgcgcctgcccgctgtatcccgccagttttgcgccgatgttcaacgtg
ctgaaaacctttatcgcccgcgccgggctgacgccatacaacgtggcgcgcaaacgcggc
gagctgaaatatctgctgctgacggaaagcaccggtaacggcggggtgatgctgcgtttt
gttctgcgttcggagagcaaactggcgcagctgcgcgccgtgctgccgtggctgcagcaa
cagctgccgcagctgcgggtgatttccgtgaatattcagccggtgcatatggcgattatg
gagggcgatcgggaaatcatcctgaccgagcaacaggcgttggaagagtgcttcaaccag
gtgccgctgtatatccgcccgcagggctttttccagaccaatccgcaggtggcggcgtcg
ctgtatgccacggcgcgcgactgggtgcgtgagctgggcatcgacagcatgtgggatctg
ttctgcggcgtcggcggcttcggtttacactgcgcacagccggaaacgcgtctgaccggg
attgagatcagcgcggaggcgattcgctgtgcgcgccagtcagcggcgacgctgggactg
cagcgggttgatttccaggcgctggactccacccgtttcgccacggcggaaggagacgtg
ccgcagctggtggtggtgaacccgccgcgacgcggcattggcaaggaactgtgcgattac
ctgcagcggatggcgccggactatctgctctattccagctgtaatgcacaaagcatggcg
caggatatggcgcagctgccggggtatcgggttgaacgggtgcagctgttcgatatgttc
ccgcataccgcgcactacgaggtgctgacgctgctggtgcgggagaagtaa
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