Serratia sp. NGAS9: GUC32_04965
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Entry
GUC32_04965 CDS
T10949
Symbol
sdeY
Name
(GenBank) multidrug efflux RND transporter permease subunit SdeY
KO
K18138
multidrug efflux pump
Organism
sern Serratia sp. NGAS9
Pathway
sern01501
beta-Lactam resistance
sern01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sern00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GUC32_04965 (sdeY)
01503 Cationic antimicrobial peptide (CAMP) resistance
GUC32_04965 (sdeY)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sern02000
]
GUC32_04965 (sdeY)
01504 Antimicrobial resistance genes [BR:
sern01504
]
GUC32_04965 (sdeY)
Transporters [BR:
sern02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
GUC32_04965 (sdeY)
Antimicrobial resistance genes [BR:
sern01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GUC32_04965 (sdeY)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QHI76961
UniProt:
A0AAX1G4C2
LinkDB
All DBs
Position
complement(1052956..1056102)
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AA seq
1048 aa
AA seq
DB search
MAKFFIDRPIFAWVIAIIVMLAGVLAIMKLPIAQYPTIAPPAVSISANYPGADAKTVQDT
VTQIIEQNMNGIDNLMYMSSTSDSSGSVTITLTFDSGTDPDIAQVQVQNKLSLATPLLPQ
EVQQQGLKVEKSSSSFLMVAGFVSDDPNMTQDDIADYVASNIKDPISRSSGVGEVQLFGA
QYAMRIWLDPNKLNNFQLTTTDVTSAITEQNNQIAAGQLGGLPPVPGQQLNASIIAQTRL
TSPEEFGKILLKVNTDGSQVRLRDVAHIERGAESYAVTARYNGKPAAGLGIKLATGANAL
NTAKGVKDELAKMAPFFPQGMKVVYPYDTTPFVKISINEVVKTLIEAIILVFLVMYLFLQ
NFRATLIPTIAVPVVLLGTFAILAAFGFSINTLTMFGMVLAIGLLVDDAIVVVENVERVM
SEEGLPPKEATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMAL
SVLVALILTPALCATLLKPIPKGDHGVKTGFFGWFNRMFEKSTHHYTDSVGNILRSTGRY
LIIYLLIVVGMGLLFLRLPSSFLPDEDQGILLTMVQLPAGATESRTNKVLEEVSDYFLNK
EKDNVVSVFTVAGFGFNGNGQNNGLAFVSLKDWGERPGAGNKVEAIAGRAMGAFSQIKEG
LVFPFNLPAIIELGTATGFDFELIDQGGLGHEKLTEARNQLLGMVAQHPDVLVGVRPNGL
EDTPQFKLIVDQEKAKALGVSITTINSTLSTALGGSYVNDFIDRGRVKKVYVQADAPFRM
LPEDINKWYVRGTSGQMVPFSAFSSAKWEYGSPRLERYNGLPSMEILGQAAPGKSTGEAM
NLMEQLASKLPSGIGYDWTGMSYQERLSGNQAPALYAISILVVFLCLAALYESWSVPFSV
MLVLPLGVIGALLAATMRGMNNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMEKEGKGLI
EATLEAVRMRLRPILMTSLAFILGVLPLVISSGAGSGAQNAVGTGVMGGMITATVLAIFF
VPVFFVVVRRRFSKKNEDLEHSHPVEHH
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggctaagttctttatagatcgcccgattttcgcctgggtaatcgccatcatcgtcatg
ttggcgggggtgcttgcaataatgaaactgccaatcgcgcagtatcccactattgcaccg
ccggcggtgagtatttccgccaactacccgggcgcagatgccaaaacggtgcaggatacc
gtcacgcagattatcgaacagaacatgaacggtatcgataacctgatgtacatgtcctcc
accagtgattcctctggtagcgtcaccattaccctgacgtttgattccggcaccgatcct
gacatcgcgcaggttcaggttcagaacaaactgtcgttggccaccccgttgctgccgcaa
gaagttcagcaacagggcctgaaagtagaaaaatccagcagcagcttcctgatggtggcc
ggcttcgtttccgacgatccgaacatgactcaggacgatattgcggactacgtggcgtcc
aacatcaaggacccgatcagccgttcgtccggcgtgggtgaagtgcagctgttcggtgcc
cagtacgcgatgcgtatctggctggatccgaacaagctgaacaacttccaactgacgacc
acggacgtgacctccgccatcaccgagcagaacaaccagatcgccgcaggccagctgggc
ggcctgccgccggtgccggggcagcagttgaacgcctcgatcatcgcgcagacccgtctg
acttcgccggaagagttcggcaagatcctgctgaaagtgaataccgacggttctcaggta
cgcctgcgcgacgtcgctcatatcgagcgcggcgcggaaagctatgccgttaccgctcgc
tacaacggcaagcctgccgccggcctgggtatcaaactggcgaccggcgccaacgccttg
aacaccgccaaaggtgtgaaagacgagctggccaagatggcgccattcttcccgcaaggg
atgaaagtggtttatccgtacgacaccaccccgttcgttaaaatctccatcaacgaagtg
gtgaaaacgctgatcgaagccatcatcctggtcttcctggtgatgtatctgttcctgcag
aacttccgcgcgacgctgatcccaaccatcgcggtgccggtagtactgctggggaccttt
gcgatcctcgccgcgttcggcttctcgataaacaccctgacgatgttcggcatggtgttg
gcgatcggcctgctggtggatgacgccatcgtggtggtggaaaacgtcgagcgcgtcatg
tccgaagaggggctgccgccgaaagaagctacccgtaaatcgatgggccagatccagggc
gcgctggtgggtatcgccatggtgctgtcggcggtattcgtgccgatggcgttcttcggc
ggttcaaccggcgccatctatcgccagttctcgatcaccatcgtgtccgcgatggcgctg
tcggtgctggtggccttgatcctgacgccggcgctgtgcgccaccctactcaaaccgatc
ccgaaaggcgatcacggggttaaaacaggcttcttcggctggtttaaccgcatgttcgag
aagagcacgcatcactataccgacagcgtgggcaacatcctgcgcagcaccggccgctat
ctgatcatctacctgttgatcgtggttggcatgggcctgctgttcctgcgcctgccttcc
tcgttcctgccggacgaagatcagggcattctgttgaccatggtgcagttgcctgccggt
gccaccgagtcccgtaccaacaaagtgctggaagaagtctccgactacttcctgaacaag
gaaaaggacaacgtggtttcggtgtttaccgtcgcgggcttcggcttcaacggtaacggc
cagaacaacggcctggcattcgtcagcctgaaagactggggtgagcgtccaggggccggg
aacaaggtcgaggcgatcgcgggccgtgccatgggtgccttctcgcagattaaagaaggc
ctggtgttcccgttcaacctgccggcgatcatcgaactcggtaccgcaaccggcttcgac
ttcgagttgattgaccagggtggcctggggcacgaaaaactgaccgaagcgcgtaaccag
ctgttgggcatggttgctcagcatccggacgtgctggtgggtgtgcgcccgaacggcctg
gaagatacgccgcagttcaaactgatcgtcgatcaggagaaagccaaggcgctgggcgtc
agcatcactaccatcaacagcacgctgagcaccgccctgggtggttcgtacgtcaacgac
ttcatcgaccgcggtcgtgtgaagaaggtgtatgtacaggccgacgcgccgttccgtatg
ctgccggaagacatcaacaagtggtacgtgcgcggtaccagcggccagatggtgccattc
tccgccttctcttcggcgaagtgggaatacggctcaccgcgtctggaacgctataacggc
ctgccgtcgatggaaattctgggccaggccgcaccgggcaagagtaccggtgaagcgatg
aacctgatggaacagctggcatccaaactgccaagtggcatcggttacgactggaccggt
atgtcctatcaggaacgtctgtcgggcaaccaggcgccggcgctgtacgccatctcgatt
ctggtggtgttcctgtgtctggcagcgctgtatgaaagctggtccgtgccgttctcggtc
atgctggtattgccgctgggggttatcggtgcgttgctggccgcgacgatgcgcggcatg
aacaacgacgtgtacttccaggtggggctgctgaccaccatcggtctatcggcgaagaac
gccatcctgatcgttgagttcgccaaggatctgatggagaaagaaggcaaaggtctgatc
gaagcgacgttggaagcggtgcgtatgcgtttgcgtccaatcctcatgacgtccctggcc
ttcatcctcggggttctgccgctggttatcagcagcggcgcaggctccggcgcacagaac
gcggtaggtaccggcgtaatgggcgggatgatcactgccaccgtcttggcgatcttcttc
gtgccggtgttcttcgtggtggttcgccgccgcttcagcaagaagaacgaggacctggaa
cacagccatccggtagagcaccactga
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