Serratia sp. NGAS9: GUC32_04970
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Entry
GUC32_04970 CDS
T10949
Symbol
sdeX
Name
(GenBank) multidrug efflux RND transporter periplasmic adaptor subunit SdeX
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sern Serratia sp. NGAS9
Pathway
sern01501
beta-Lactam resistance
sern01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sern00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GUC32_04970 (sdeX)
01503 Cationic antimicrobial peptide (CAMP) resistance
GUC32_04970 (sdeX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sern03036
]
GUC32_04970 (sdeX)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sern02000
]
GUC32_04970 (sdeX)
01504 Antimicrobial resistance genes [BR:
sern01504
]
GUC32_04970 (sdeX)
Chromosome and associated proteins [BR:
sern03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
GUC32_04970 (sdeX)
Transporters [BR:
sern02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GUC32_04970 (sdeX)
Antimicrobial resistance genes [BR:
sern01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GUC32_04970 (sdeX)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
HH_MFP_RND
RND-MFP_C
YknX_C
HH_CzcB
Beta-barrel_RND_2
BSH_CusB
BSH_CzcB
HH_AAEA_pHBA
HH_EMRA
HH_YBHG
TPR_8
Motif
Other DBs
NCBI-ProteinID:
QHI76962
LinkDB
All DBs
Position
complement(1056120..1057307)
Genome browser
AA seq
395 aa
AA seq
DB search
MNKNRGLTPLAAVLMLSGSLVLTGCNDKETQQQGAQQQAPEVGVVTLKAEPLNITTDLPG
RTAAYRIAEVRPQVSGIILKRNFVEGSDIKAGTSLYQIDPATYQASYDSAKGDLAKAQAS
ASIARVTVNRYKPLLGTSYISKQDYDNAVSTLQQADAAVVAAKAAVETARINLAYTKVTS
PISGRIGKSAVTEGALVSNGQATALSTVQQLDPMYVDVTQSSTDFLRLKQELASGALKQE
NGKAKVKLMLENGTEYAQEGTLEFSDVTVDETTGSITIRALFPNPNDTLLPGMFVRARLD
EGVRSDALLVPQQGVTRNPRGDATALVVGADDKVELRTLKADQAIGDKWLVTDGLKSGDR
VIVSGLMKVHPGAQVKVQEVDTQAQKQPQSEAQKS
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaacagagggttaacgcctctggcggccgttctgatgctttcaggcagctta
gtgctaacaggatgtaacgataaagaaacccaacagcaaggcgcccaacaacaggcgcct
gaagtgggcgtagtcaccttgaaggctgagcctctcaacattactaccgatcttcctggc
cgcaccgctgcgtatcgtatcgccgaagttcgccctcaggtcagcggcatcatcctgaag
cgcaacttcgttgaaggcagcgatatcaaggccgggacgtctctgtaccaaatcgatccc
gcaacctatcaagccagctacgacagcgcgaaaggcgatttggccaaagcacaggccagc
gcttccatcgcacgcgtgacggtaaaccgctacaagccattgctgggcacgagctacatc
agtaaacaggactacgacaacgccgtctccacgctgcagcaggcggacgccgccgtcgtg
gccgccaaggccgccgtggaaaccgcgcgcatcaacctggcgtacaccaaggtgacctct
ccgatctccggccgcatcggcaagtccgccgtgaccgaaggcgctctggtcagcaacggc
caggcaaccgcactgtctaccgtgcagcagctggatccgatgtatgtcgacgtcacccag
tcaagcactgatttcctgcgcctgaagcaagagctggccagcggcgcgctgaagcaggaa
aacggcaaggcaaaagtgaaactgatgctggaaaacggcaccgaatacgcgcaggaaggc
acgctggagttctctgacgtcaccgtcgatgaaaccactggctccatcaccattcgcgcc
ctgttccctaacccgaacgatacgctgttgccgggcatgttcgtacgcgcccgtctggac
gaaggcgtgcgcagcgatgcgctgctggtgcctcagcaaggcgttacccgcaacccgcgc
ggcgacgcgacggcgttggtggtaggggcagacgacaaagttgagctgcgcacgctgaag
gccgaccaggcgatcggcgacaaatggctggttaccgatggcctgaaatccggcgatcgc
gtgatcgtctccggcctgatgaaagtgcatccgggcgcgcaggtaaaagtgcaggaagtt
gacactcaggcgcaaaaacagccgcagtctgaagcgcagaagtcataa
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