Prodigiosinella confusarubida ATCC 39006: CWC46_06190
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Entry
CWC46_06190 CDS
T05968
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
serq
Prodigiosinella confusarubida ATCC 39006
Pathway
serq00540
Lipopolysaccharide biosynthesis
serq01100
Metabolic pathways
Module
serq_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
serq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CWC46_06190 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
serq01005
]
CWC46_06190 (lpxC)
Enzymes [BR:
serq01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
CWC46_06190 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
serq01005
]
Lipid A
CWC46_06190 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LpxC
DUF6225
Motif
Other DBs
NCBI-ProteinID:
AUG99441
UniProt:
A0A2I5T4I3
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All DBs
Position
1340340..1341257
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AA seq
305 aa
AA seq
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MIKQRTLKRIVQATGVGLHTGKKVTLTMRPAPANTGVIYRRTDLNPPVDFPADAKSVRDT
MLCTCLVNEHDVRISTVEHLNAALAGLGIDNIVIDVDAPEIPIMDGSASPFVYLLLDAGI
EELNCAKKFVRIKQPVRVEDGDKWAELTPFNGFSLDFTIDFNHPAIGAGSQRYCLDFSAD
AFVRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVVDDYRVLNEDGLRFDDEFVRHKM
LDAIGDLFMCGHNIIGAFTAFKSGHALNNKLLQAVLAKQEAWEYVTFENEAEMPLAFKAP
STVLA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacaacgaactttaaagcgtattgtacaggcgacaggggtcggtttgcatacc
ggcaagaaagtcaccttgactatgcgccctgcaccggctaataccggggtcatctatcgc
cgtactgacttgaatccaccggttgattttccggctgacgcaaaatcagtgcgtgatacc
atgctttgtacttgcttggttaatgagcatgatgttcgtatttctacagtagaacatctg
aatgccgcgctcgctggcttgggcattgataacattgttattgatgttgatgcacctgaa
attccaatcatggatggcagcgccagcccatttgtttatttactgttggatgcgggtatt
gaagagctgaactgtgctaaaaagttcgttcgaatcaaacagcctgtgcgtgttgaagac
ggtgataaatgggctgagttgacaccatttaatggttttagcttggattttaccatcgac
tttaatcacccagcgattggtgccggttctcagcgttattgtctggatttttccgctgat
gcttttgttcgtcagatcagcagggcacgcacgtttggctttatgcgtgatattgaatat
ctgcagtctcgagggttgtgcctgggcggcagtttcgattgcgctatcgtcgttgatgat
tatcgtgtcttaaatgaagatggtttgcgttttgatgatgaatttgtccgtcacaaaatg
ttagacgcgattggtgatttgtttatgtgtggtcataacatcatcggtgcattcacggca
tttaagtcaggtcacgcgcttaacaacaagctgttgcaggctgtgctggcgaaacaggaa
gcatgggaatatgtcacctttgaaaacgaggctgaaatgcctttggctttcaaagcacct
tctactgtgttggcctga
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