Serratia sp. Tan611: TAN611_3757
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Entry
TAN611_3757 CDS
T10950
Symbol
ygdE
Name
(GenBank) putative methyltransferase
KO
K06968
23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:
2.1.1.186
]
Organism
sert Serratia sp. Tan611
Brite
KEGG Orthology (KO) [BR:
sert00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sert03009
]
TAN611_3757 (ygdE)
Enzymes [BR:
sert01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.186 23S rRNA (cytidine2498-2'-O)-methyltransferase
TAN611_3757 (ygdE)
Ribosome biogenesis [BR:
sert03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
TAN611_3757 (ygdE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RLMM_N
RlmM_FDX
FtsJ
Spt5-NGN
MIT_C
Motif
Other DBs
NCBI-ProteinID:
CAE1149341
LinkDB
All DBs
Position
Tan611:complement(3874345..3875448)
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AA seq
367 aa
AA seq
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MNKVALYCRPGFEKECAAEITDKASQLEIFGFARVKENSGYVLFECYQPDDADRLAKEIP
FRELIFARQLIVVGELLRDLPPEDRVSPIVGMLIGVVDRGGELRVEVADTNESKELMKFC
RKLTVPLRAAMREQKVLMARENPTRPVVHVFFIAPGCCYVGYSYSNNNSPFYMGIPRLKF
PADAPSRSTLKLEEAFHVFIPADEWDERLGSGMHAVDLGACPGGWTYQLVKRSMMVHAVD
NGPMAPSLMDTGQVTHHRADGFKFEPNSSKIYWLVCDMVEKPAKVTSLMIQWLVKGWCRE
AIFNLKLPMKKRYEEVSQNLQSIREALGAAGISADVHAKQLYHDREEVTVHVRRMWSAVP
GRRDERD
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagttgcattgtactgccgccccggctttgaaaaagagtgcgcggcggaaatt
acggataaagcctctcagttggagattttcggctttgcccgggtaaaagaaaacagcggc
tatgtgctgtttgagtgctatcagccggacgatgctgaccggctggcgaaagaaattccc
ttccgcgagctaatttttgcccgccagctgattgtcgtcggtgagctgctgcgcgatctg
ccgccggaagaccgcgtttcgccgattgtcggtatgctgatcggcgtggtcgatcgcggc
ggcgagctgcgggtagaagtggcggacaccaacgaaagcaaagaactgatgaagttctgc
cgcaagctgacggtgccgctgcgcgccgcgatgcgtgagcagaaggtgctgatggcgcgt
gaaaacccgacgcggccggtggtgcacgtgttctttatcgcgccgggatgctgctatgtc
ggctattcatacagcaacaataactcgccgttctatatgggcatcccgcggctgaaattc
ccggccgatgcgccaagccgttcaacgttgaagctggaagaagcgttccacgtgtttatt
cccgccgatgagtgggacgaacgtctgggcagcggcatgcacgccgtggatcttggggcc
tgccctggcggctggacctatcagttggtgaagcgcagcatgatggtgcatgcggtggat
aacggcccgatggcgccaagcctgatggataccggtcaggttacccatcatcgcgccgac
ggttttaaatttgagccgaacagcagcaaaatctactggttggtgtgcgatatggtggag
aagccggctaaggtcaccagcctgatgattcagtggctggtcaaaggctggtgccgtgag
gcgatcttcaacctgaagctgccgatgaagaagcgttacgaagaggtctcgcagaatctg
cagagcatccgggaggcgttgggtgcggcaggcatcagcgcggatgtgcatgccaagcag
ctgtatcatgaccgtgaagaggtgacggtgcacgtacgccgcatgtggtccgccgtgccg
ggccgccgcgacgaacgggactga
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